Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1176 |
Symbol | dhaF |
ID | 4202130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1341350 |
End bp | 1343200 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638082057 |
Product | glycerol dehydratase reactivation factor, large subunit |
Protein accession | YP_695622 |
Protein GI | 110798899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.391158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA TAGCAGGAAT TGATATAGGA AACTCTTCTA CAGAAACTGC TTTAGGTAAG GTTTATGAAA ATAATGTTGA ATTTCTGTCT AGTGGGATAA TTCCCACTAC AGGAATCAAA GGAACGGAAG AAAATATAAG TGGGGTAATA GCTTCTTTAA ACCAAGCTTT AAAGAAAGCT AACTTAACTT TAGAAGATTT AGATTTAGTT AGAATTAACG AAGCAGCACC TGTTATAGGG GATGTTGCTA TGGAAACAAT AACTGAAACA ATAATAACTG AATCAACAAT GATAGGACAT AACCCGTCTA CTCCAGGAGG ATTAGGTGTA GGAATAGGTA AAACTATAAG ATTAGAAACT TTAGAAACTT TAAATATTAA TGAAATCAAA GAGGAAGATA ATGCTTTTAT TCCATTGGTT TTAGGAAATA TAAGTTTTTT AGAGGCTGTA TTTAGAATAA ATCAAGCAAC TAGAAGAGGT ATTAATATAA CTGCTGCCAT TGTTCAAAAG GATGATGGAG TATTAATCAA TAACAGATTA GATAAAAAAA TACCTATAGT TGATGAAGTT TCTCTTTTAG AAAAGGTTCC TGTAGATATG AAAGCAGCTG TTGAAGTAGC ACCACAAGGT TCAGTAATAA GACAGCTATC AAATCCATAT GGAATAGCTA CTGTTTTTGA CTTAAGTCCA GAAGAGACAA AAATGATTGT TCCTGTATCA AGAGCCTTAA TAGGAAATAG ATCAGCTGTT GTAATAAAAA CTCCTCAAGG GGATGTTAAG GAAAAGAAAA TACCAGCTGG TAAGATTAAT ATAACAGGAA TGAGAAGAAA AGAGTCTGTG GATGTTGAAG AGGGAGCAGA TAAAATAATG GAGGCTGTTA GCCTTTGTTC TCCAATAGAA GATTTAAGAG GAGATGCTGG TTCTAATGTT GGAGGAATGC TTGAAAAAGT TAGACAAGTT ATGGCTGATT TAACTAATCA AAGCATTTCA GATATAAAGA TTCAGGATTT ATTAGCAGTA GATACTTTTA TCCCTCAAAA GGTTAAGGGT GGACTTGCAA AAGAGTTTTC AATGGAGAAT GCTGTTGGAA TAGCAGCAAT GGTTAAAGCT CATAAACTTC AAATGCAAAT AATAGCTAAT AAACTTGAAG AAAAGTTAGG TGTTCCAGTA GAAGTTGGTG GAGTAGAAGC TGACATGGCA ATAAGAGGAG CCTTAACAAC TCCAGGTACA AATACTCCTT TAGCTATTTT AGATATGGGA GCTGGATCTA CAGATGCTTC TATTATAAAT AAAGAAGGTA AAATAACATC AATACATTTA GCTGGTGCAG GAAACATGGT AACTATGCTT ATTAAATCAG AATTAGGTAT AGAAGACTTT GGACTTGCAG AGGATATAAA GAAATATCCT TTAGCTAAGG TTGAGAGTTT GTTCCATATA AGACATGAAG ATGGAACTGT AGAGTTCTTT GAAAAACCTT TAGATTCTTC AGTTTTTGCT AAGATTGTAA TTATTAAAGA GGGAATGCTT ATTCCGGTAG ATGGACAGAA TTCTTTAGAA AAGATTAAAA ATGTTAGAAA AACTGCTAAG GAAAGAGTTT TTGTAATTAA CTGTTTAAGA GCATTAAAAA GTGTTTCACC TACAGGAAAT ATAAGAGATA TAGAATTCGT TGTTTTAGTT GGAGGATCAT CATTAGACTT TGAGGTTCCT GAATTAGTAA CAGATGCTTT ATCTCATTAT GGAGTAGTTG CAGGAAGAGG AAATATAAGA GGATGTGAAG GTCCAAGAAA TGCAGTTGCA ACTGGATTAG TATTAGCCTT TGACAGAAAG GGTGTCAAGG AAAATGATTA A
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Protein sequence | MKIIAGIDIG NSSTETALGK VYENNVEFLS SGIIPTTGIK GTEENISGVI ASLNQALKKA NLTLEDLDLV RINEAAPVIG DVAMETITET IITESTMIGH NPSTPGGLGV GIGKTIRLET LETLNINEIK EEDNAFIPLV LGNISFLEAV FRINQATRRG INITAAIVQK DDGVLINNRL DKKIPIVDEV SLLEKVPVDM KAAVEVAPQG SVIRQLSNPY GIATVFDLSP EETKMIVPVS RALIGNRSAV VIKTPQGDVK EKKIPAGKIN ITGMRRKESV DVEEGADKIM EAVSLCSPIE DLRGDAGSNV GGMLEKVRQV MADLTNQSIS DIKIQDLLAV DTFIPQKVKG GLAKEFSMEN AVGIAAMVKA HKLQMQIIAN KLEEKLGVPV EVGGVEADMA IRGALTTPGT NTPLAILDMG AGSTDASIIN KEGKITSIHL AGAGNMVTML IKSELGIEDF GLAEDIKKYP LAKVESLFHI RHEDGTVEFF EKPLDSSVFA KIVIIKEGML IPVDGQNSLE KIKNVRKTAK ERVFVINCLR ALKSVSPTGN IRDIEFVVLV GGSSLDFEVP ELVTDALSHY GVVAGRGNIR GCEGPRNAVA TGLVLAFDRK GVKEND
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