| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1170 |
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| Symbol | |
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| ID | 4203365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1335411 |
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| End bp | 1336115 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082051 |
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| Product | putative glycerol uptake facilitator protein |
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| Protein accession | YP_695616 |
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| Protein GI | 110800510 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.351362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAT TATTAGCAGA ATTAATAGGA ACAATGCTAC TTATCATACT TGGTGATGGT
GTTGTTGCAA ACGTAGTTTT AAAGAAAACA AAGGGAAATA GCTCAGGATG GATAGTTATA
ACTACTGGAT GGGCTTTAGC AGTTGCTATA CCAGCAGCTA TTTTTACTAG TGTAAGTGGA
GCATTATTTA ATCCAGCATT AACAATAGCA TTAGCTATAG TTGGCCAATT TACATGGTCT
CAAGTTATTC CTTATATAAT TGCACAACTT TTAGGAGCTT TTTTAGGAGC AGTTGTTGTT
TATATAACTT ACTATAATCA TTTTGAAGAA ACAGAAGATC AAAATTCAAA ATTAGGAGTA
TTTTGTACTA TTCCAGAAAT AGAAGATCAT AAAATAAACT TCTTAACAGA GTTTATAGGA
ACTTTTGTTT TAACTTTTGC TGTATTAGGA ATAGGAGCAC AAAATATAGA TTATGGTGTT
AAAGTAATTA TAATAGGATG CTTAATATGG GCTATAGGAT TAAGCTTAGG TGGTCCAACA
GGATATGCAA TAAATCCAGC TAGAGATTTT GGTCCAAGAT TAGCACACTT CTTACTTCCG
ATTCCTAGAA AAGGAAGTTC TAAATGGGAA TATGCTTGGA TTCCTATAGT TGCACCAATA
ATAGGAGCAA TATGTGGAGC CTTAGTTTAT GTAAATATAT TTTAA
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| Protein sequence | MASLLAELIG TMLLIILGDG VVANVVLKKT KGNSSGWIVI TTGWALAVAI PAAIFTSVSG
ALFNPALTIA LAIVGQFTWS QVIPYIIAQL LGAFLGAVVV YITYYNHFEE TEDQNSKLGV
FCTIPEIEDH KINFLTEFIG TFVLTFAVLG IGAQNIDYGV KVIIIGCLIW AIGLSLGGPT
GYAINPARDF GPRLAHFLLP IPRKGSSKWE YAWIPIVAPI IGAICGALVY VNIF
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