Gene CPF_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1168 
Symbol 
ID4203926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1333999 
End bp1334829 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content26% 
IMG OID638082049 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_695614 
Protein GI110800834 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAT TGAGAATAAC TACATTAGTA GAAAACACAA AAATATCAGA TGAATATGAA 
AATAAGCATG GCTTATCATT TCATATAGAA ACAGAAAAAC ATAATATACT TTTTGATTTA
GGGCCTAAAA ATACATTTTT AACAAATGCA AAGAAGTTAA ATATAAACTT AGAAGAAGTT
GATATTGTAG TAATATCTCA TGGTCATAAT GATCATGGTG GTGGGTTAGA AGAATTTTTA
AAAATAAATA ATAAAGCTAA GGTTTATATA CACAAAGATG CTTTCAATGA GTATTATAGT
ATGGCAGGAA TTTTCAAAAA GTATATAGGA TTAGATAAAG AATTAAAGAA AAATCCAAGA
ATAATATTGA CAGAGGGAGA TATGAAAATA GATGATGAGT TATATTTATT TTCAGTAGTA
GAAAATAGAC ATAAAGTATC TAAATTTAAT AAGGTCCTTT ATAAAAGAGT AGATGGTATG
TACTTAGAAG ATGATTTTGT ACATGAACAA AGTCTTATAA TAACAGAAAA TAATAAGAAT
GTACTAATGG GTGGTTGTGC TCATAATGAC ATAAGAAATA TAATTGATAA GGCAGAGGTT
ATAATAGGAA AAGATTTAGA CTATGTTATA AGTGGTTTCC ATATTTTTAA TCCTAGCACA
GGAATAAGTG AAAGTGATTT ATTCATAAAT ACTTTAGGAG ATAACTTAAA TAAAAGAAAT
ACTAAGTTTT ATACTTGTCA CTGCACAGGA ATGAGAGCAT TTAAAATGCT AGAGGAAAAG
TTACAAGATA AAATAGAGTA TATTTCTACT GGACAAGTTT TAAATATATA A
 
Protein sequence
MSKLRITTLV ENTKISDEYE NKHGLSFHIE TEKHNILFDL GPKNTFLTNA KKLNINLEEV 
DIVVISHGHN DHGGGLEEFL KINNKAKVYI HKDAFNEYYS MAGIFKKYIG LDKELKKNPR
IILTEGDMKI DDELYLFSVV ENRHKVSKFN KVLYKRVDGM YLEDDFVHEQ SLIITENNKN
VLMGGCAHND IRNIIDKAEV IIGKDLDYVI SGFHIFNPST GISESDLFIN TLGDNLNKRN
TKFYTCHCTG MRAFKMLEEK LQDKIEYIST GQVLNI