Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1168 |
Symbol | |
ID | 4203926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1333999 |
End bp | 1334829 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638082049 |
Product | metallo-beta-lactamase family protein |
Protein accession | YP_695614 |
Protein GI | 110800834 |
COG category | [R] General function prediction only |
COG ID | [COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.148902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAAAT TGAGAATAAC TACATTAGTA GAAAACACAA AAATATCAGA TGAATATGAA AATAAGCATG GCTTATCATT TCATATAGAA ACAGAAAAAC ATAATATACT TTTTGATTTA GGGCCTAAAA ATACATTTTT AACAAATGCA AAGAAGTTAA ATATAAACTT AGAAGAAGTT GATATTGTAG TAATATCTCA TGGTCATAAT GATCATGGTG GTGGGTTAGA AGAATTTTTA AAAATAAATA ATAAAGCTAA GGTTTATATA CACAAAGATG CTTTCAATGA GTATTATAGT ATGGCAGGAA TTTTCAAAAA GTATATAGGA TTAGATAAAG AATTAAAGAA AAATCCAAGA ATAATATTGA CAGAGGGAGA TATGAAAATA GATGATGAGT TATATTTATT TTCAGTAGTA GAAAATAGAC ATAAAGTATC TAAATTTAAT AAGGTCCTTT ATAAAAGAGT AGATGGTATG TACTTAGAAG ATGATTTTGT ACATGAACAA AGTCTTATAA TAACAGAAAA TAATAAGAAT GTACTAATGG GTGGTTGTGC TCATAATGAC ATAAGAAATA TAATTGATAA GGCAGAGGTT ATAATAGGAA AAGATTTAGA CTATGTTATA AGTGGTTTCC ATATTTTTAA TCCTAGCACA GGAATAAGTG AAAGTGATTT ATTCATAAAT ACTTTAGGAG ATAACTTAAA TAAAAGAAAT ACTAAGTTTT ATACTTGTCA CTGCACAGGA ATGAGAGCAT TTAAAATGCT AGAGGAAAAG TTACAAGATA AAATAGAGTA TATTTCTACT GGACAAGTTT TAAATATATA A
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Protein sequence | MSKLRITTLV ENTKISDEYE NKHGLSFHIE TEKHNILFDL GPKNTFLTNA KKLNINLEEV DIVVISHGHN DHGGGLEEFL KINNKAKVYI HKDAFNEYYS MAGIFKKYIG LDKELKKNPR IILTEGDMKI DDELYLFSVV ENRHKVSKFN KVLYKRVDGM YLEDDFVHEQ SLIITENNKN VLMGGCAHND IRNIIDKAEV IIGKDLDYVI SGFHIFNPST GISESDLFIN TLGDNLNKRN TKFYTCHCTG MRAFKMLEEK LQDKIEYIST GQVLNI
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