Gene CPF_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1159 
SymboldedA 
ID4202458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1326587 
End bp1327231 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content27% 
IMG OID638082040 
ProductdedA protein 
Protein accessionYP_695605 
Protein GI110800711 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000684044 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAA TAAGCAATTT TTTTGATTTA ATATTACATT TAGATAAATA TCTAGGTGTT 
TTTATCAATA ATTATGGAAC CTTGACTTAC TTGGTTTTAT TCTCAATAAT CCTTGCGGAA 
ACAGGATTAG TAGTAACTCC TTTTCTTCCT GGAGATTCAG TAATATTTGC ATCAGCTACT 
TTCTGTGCTT TAGGCATGAT TAATATTTAC ATATTAGTAC CATTATTATT AATTGCAGCC 
ATACTTGGAG ATACTTTAAA CTATAGTATT GGTAAATTTT TAGGTAGCAA ATTACTTGCT 
AATTCTAAAC TTATAAAAAA AGAGTATATT GATAAAACTA ATACTTATTA TGATAAATAT 
GGTGGAAAAA CCTTAATAAT AGCTAGATTT ATTCCTATAA TTCGTACCTT TGCTCCCTTT 
GTTGCAGGTA TAGGAACAAT GAAATATAAA AACTTTTTAA CTTACAATGC AGTTGGTGGA 
TTTATTTGGG TTATACTTGT ATCAAGTTTA GGATATTTCT TTGGTAATAT AAAAATTATT 
GCTGAAAATT TCTCAATAGT TATTATAGGT ATAATAGTTG TTTCTATTTT ACCTGCTATA 
GTAGGAATAC TTAAAGCTAA ATTTTCACCT AAAGCTGCTA TTTAA
 
Protein sequence
MNLISNFFDL ILHLDKYLGV FINNYGTLTY LVLFSIILAE TGLVVTPFLP GDSVIFASAT 
FCALGMINIY ILVPLLLIAA ILGDTLNYSI GKFLGSKLLA NSKLIKKEYI DKTNTYYDKY 
GGKTLIIARF IPIIRTFAPF VAGIGTMKYK NFLTYNAVGG FIWVILVSSL GYFFGNIKII 
AENFSIVIIG IIVVSILPAI VGILKAKFSP KAAI