Gene CPF_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1156 
Symbol 
ID4203431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1323322 
End bp1324476 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content24% 
IMG OID638082037 
Productlysine-N-methylase-like protein 
Protein accessionYP_695602 
Protein GI110799844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.609349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAA ATTTTTTTAT TCCAAAATAT ATGAAGACAT TTAAATGCAT AGGTCCTAAT 
TGCACTGATA CTTGTTGTGC TGGTTGGGAC ATTAACATAG ATGAAAATAC TTTTAAAAAG
TATGAAAATG ATAAAGGAAA TCTAAAAGAA TTAATAACTG GAAAATACAT AAAAAACTCT
CAATCAGATG ATTCTTTTAA TTATGGATTT ATGAAAATAA CAGAAGATAA TAAATGCCCC
TTTTTAAATG AAAACTTACT TTGTGAAATT CACGGTAAAT GTGGCGAAGA AAACTTATCT
ATAACCTGTA GAAGATATCC TAGAGTTTTT AATATTATAG ATGATATATA TGAGAAAAGC
GGACTTCCTT CCTGTGAAGA AATCTGTTCT AAAGCTTTTT TAAATAAAGA AAAAATGGAA
TTTATAGAAA TAGAAGAAGA TCTTCCTGAA GATTTCCTAG AAATACGCAG AGTAATAGAT
ACTGAAGCTT TTATAGGTTC AGATAATTTA ATTCAATATT TTTGGGATAT AAGAATTATA
TCAATAAATA TTATGCAAAA CAGAAATTTC TCTATTGAGA AGAGACTAAG TCTATTAAGA
GCCTTTTATA AAAGTCTAGA AGATCTAAAA ACTGAAGAAA ACTTTTATGA AATTGAAGAT
TTACTTGAAA AAATAACTGA ATATCCATCA AATATAACTG AATTTATTGA TTCTAAGAAA
ATTATTCCAC TTAGTATTAC CAATAACTTT TTTAAGATTA TATTAGATGA AAAACTTTTA
AGAAAAGTCA TTGGTACTAG GCTAAAGAAA TTGTTATTAG ATTTAAATAA GGATCAAAAT
TTATTTAACA ATATACATAA ATATGACTTA AACTCCTTTG ATACTTACTT TAAGAAGTAC
TCATACATAT TTGAAAATTA CTTAGTAAAT CAAATTTTTA AGGATATAAT TCCCTTTAAT
ACAGGTGGTG ATTTAAATGA AAGTATTCAT AAGCTTATAA ATACTTATAA ACTAATAAAA
AGCTATTTAA TACTTTGGAA CATCTCATCA CAAAATGAAA TTTCAGAAAA AAATATAATA
TATGTAATTC AAGCTTTAAG TAAGGATTTA GAACATAATA AAGTATTTAA AGATATTCTA
AATTATAATA TTTAA
 
Protein sequence
MKTNFFIPKY MKTFKCIGPN CTDTCCAGWD INIDENTFKK YENDKGNLKE LITGKYIKNS 
QSDDSFNYGF MKITEDNKCP FLNENLLCEI HGKCGEENLS ITCRRYPRVF NIIDDIYEKS
GLPSCEEICS KAFLNKEKME FIEIEEDLPE DFLEIRRVID TEAFIGSDNL IQYFWDIRII
SINIMQNRNF SIEKRLSLLR AFYKSLEDLK TEENFYEIED LLEKITEYPS NITEFIDSKK
IIPLSITNNF FKIILDEKLL RKVIGTRLKK LLLDLNKDQN LFNNIHKYDL NSFDTYFKKY
SYIFENYLVN QIFKDIIPFN TGGDLNESIH KLINTYKLIK SYLILWNISS QNEISEKNII
YVIQALSKDL EHNKVFKDIL NYNI