Gene CPF_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1152 
Symbol 
ID4202273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1317389 
End bp1318063 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content24% 
IMG OID638082033 
Producthypothetical protein 
Protein accessionYP_695598 
Protein GI110799023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000457127 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA ATAAGGTTAA AGTGTGGTTT TTAAAGTTAG TTGTAAGTTT AGTGTCTGTA 
CTAATTATTT ATACAATTGC ATCTGATTTG TATAAAATAG CTTATCTTGA ATTTAAAGGA 
GTAGAAACAA CAGGAAAGTT AATAACTTTT AATGAAAAGA TTAATTCGGG AAAGTTTAAG 
TCAAAATCAT ATACTCCCGT TGTAAGGATA AAGGTTTACG GACAAGAGAT TGATGTTCCT 
GCAAAGTTAA ATAAAATTGA TAAAGACTTA GTTGACTTTG TTGGAGATGA AGTGAAAGTT 
AAATATTCTT CTAAGGATTA TAATCTTTTA ATTATAAATG ATAAAAAATA TCTTTTAAAT 
AGAATTAATT ACATGCTACT AACAGTTCAA ATTTTAATAT TTGCTTTATT ATCTGTTTGT 
ATGAAGGCTA CTTGTGGAGA AGATGGTAAA GTAAAGTGGA TTATGAAAAA GAAAAATCCA 
TTTTTAAATT TAATTTTTCT TATTCCTGGA GTAATATTTT CATTTTCATG GATTTATTAT 
CAAATAATAT TAGGGAAGTA TGCCATGGAA CAGTTTGACT TTATAGGTGC ATTAGGTACA 
TTTATGTTTT TATTAGTTTA TATTATTATT GCTTATAGTT TTATTAAAAG TAATAAGAAG 
TTTCATAAAG TTTAA
 
Protein sequence
MENNKVKVWF LKLVVSLVSV LIIYTIASDL YKIAYLEFKG VETTGKLITF NEKINSGKFK 
SKSYTPVVRI KVYGQEIDVP AKLNKIDKDL VDFVGDEVKV KYSSKDYNLL IINDKKYLLN 
RINYMLLTVQ ILIFALLSVC MKATCGEDGK VKWIMKKKNP FLNLIFLIPG VIFSFSWIYY 
QIILGKYAME QFDFIGALGT FMFLLVYIII AYSFIKSNKK FHKV