Gene CPF_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1108 
Symbol 
ID4201272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1264229 
End bp1264960 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content30% 
IMG OID638081989 
Producthypothetical protein 
Protein accessionYP_695554 
Protein GI110800850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0124873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA AGCTTAGTGA TGTTAGAGAT TTCGTCAGAG AACTTATTAA AACAGATGAA 
TTCGAAGATG AACTTTTCTT AAGTACTATT AATAATGCTA GAGATAATCT TAAAAAGAGC
GAAGAAGAGG CGTGTTATGA AGATGAGGGG GTTATTGTTG GTATAGGGGA TAAGACCTAT
ATGGATATTA AGGGAGATAG TGCAATGGTT CTTCAAAATA AAGATGAATT TAACCTATTA
TTAAGATGGG ATAATTCAAA TAAAGAAGAT CATTTTGCTA TTAACTACGG AAAGTTAGAA
CTTGGATTTC AGATTTATCC CAAAAAGGAG TTTGGACTTT CAAGAGATTT TATAGGGTTT
ACTCTAACTA TAGATGGGGT TTTGGAATGT AGTGCTTTTC CAGTGGATTT AAATTTTGCT
TCCGATGATT TTTATTTATC AGAAGATTTA GATTATACCT TTGAAATCCT TTTGATTGAA
GGAAAAGAAG GGATAGTTAG AGCTATGAGA GATGTAAAAA TACCAAGAGA GTTTTGTAAG
GTTATTAGAG AATGTTATCT TAAAATAAAA AGTGATGAAT ATGAAGAATT AGAAGGTTTA
GAAGATAGGA TGAACATACA ATGGCATGTT AGAAAGCTTG GAGGGAAGAT GGTTGAAAGG
AAGTATGGAG TTTACAAAAT TAAAAATGAA ATCCAAATGT CAAAATTAAA TTCTTACATA
AAGTTAATAT AG
 
Protein sequence
MNEKLSDVRD FVRELIKTDE FEDELFLSTI NNARDNLKKS EEEACYEDEG VIVGIGDKTY 
MDIKGDSAMV LQNKDEFNLL LRWDNSNKED HFAINYGKLE LGFQIYPKKE FGLSRDFIGF
TLTIDGVLEC SAFPVDLNFA SDDFYLSEDL DYTFEILLIE GKEGIVRAMR DVKIPREFCK
VIRECYLKIK SDEYEELEGL EDRMNIQWHV RKLGGKMVER KYGVYKIKNE IQMSKLNSYI
KLI