Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1108 |
Symbol | |
ID | 4201272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1264229 |
End bp | 1264960 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081989 |
Product | hypothetical protein |
Protein accession | YP_695554 |
Protein GI | 110800850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0124873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGA AGCTTAGTGA TGTTAGAGAT TTCGTCAGAG AACTTATTAA AACAGATGAA TTCGAAGATG AACTTTTCTT AAGTACTATT AATAATGCTA GAGATAATCT TAAAAAGAGC GAAGAAGAGG CGTGTTATGA AGATGAGGGG GTTATTGTTG GTATAGGGGA TAAGACCTAT ATGGATATTA AGGGAGATAG TGCAATGGTT CTTCAAAATA AAGATGAATT TAACCTATTA TTAAGATGGG ATAATTCAAA TAAAGAAGAT CATTTTGCTA TTAACTACGG AAAGTTAGAA CTTGGATTTC AGATTTATCC CAAAAAGGAG TTTGGACTTT CAAGAGATTT TATAGGGTTT ACTCTAACTA TAGATGGGGT TTTGGAATGT AGTGCTTTTC CAGTGGATTT AAATTTTGCT TCCGATGATT TTTATTTATC AGAAGATTTA GATTATACCT TTGAAATCCT TTTGATTGAA GGAAAAGAAG GGATAGTTAG AGCTATGAGA GATGTAAAAA TACCAAGAGA GTTTTGTAAG GTTATTAGAG AATGTTATCT TAAAATAAAA AGTGATGAAT ATGAAGAATT AGAAGGTTTA GAAGATAGGA TGAACATACA ATGGCATGTT AGAAAGCTTG GAGGGAAGAT GGTTGAAAGG AAGTATGGAG TTTACAAAAT TAAAAATGAA ATCCAAATGT CAAAATTAAA TTCTTACATA AAGTTAATAT AG
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Protein sequence | MNEKLSDVRD FVRELIKTDE FEDELFLSTI NNARDNLKKS EEEACYEDEG VIVGIGDKTY MDIKGDSAMV LQNKDEFNLL LRWDNSNKED HFAINYGKLE LGFQIYPKKE FGLSRDFIGF TLTIDGVLEC SAFPVDLNFA SDDFYLSEDL DYTFEILLIE GKEGIVRAMR DVKIPREFCK VIRECYLKIK SDEYEELEGL EDRMNIQWHV RKLGGKMVER KYGVYKIKNE IQMSKLNSYI KLI
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