Gene CPF_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1107 
Symbol 
ID4203852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1263374 
End bp1264051 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content31% 
IMG OID638081988 
Producthypothetical protein 
Protein accessionYP_695553 
Protein GI110800010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.255778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATG AATTTGATAT TGAATTTAAA AACTATTTGT ATCAGGTTTT AGGAAAGGAC 
AACCTTCAGG AACTAGAATC TAATGATGAA GATGGAGAGT GTTATTTAGA GGTTGGCAGC 
AAGCTTTCTA TAGATCTTTC GGAAGACATG GTTAGCCTTT TGACGGATAA GGATAGTCTC 
CTAGTTATTT TAAGGTTTCC AAGTGAAGCT AAGAAGAGTT TTAGAGGCGT AAGTAAAGGA 
AAGGTTGATT TTGGATTTCA ACTTTTTAAG AGAGAAGACT TTGATATTAA TTATGATTTT 
GTTGGATTTA CCTTATCAAT AAAGGATGCT GTTGATTATA GTGATATGAG GCTAGACTTT 
AATTTTACTC CTGAAGGTTT TGAATTTTCT GAGAAAATGA ATTACGCTTT AAATATAATT 
GCTATAGATG AAAAGCATAT AGTAAGAGCT ATGAGACATA TTAGATTCCC AAGGGAGCTT 
TGTAAGATTA TTAGGGAGTA TTATTTAAAA ATTACAAGGG AAGATTATAA TAGAGAAGTT 
GCTCTAGAAG ACTTAGAAAA TCTTGATGCT ATACTTTTTG ATGGAATAAC ATCAAAGCAG 
GTAGAAGAAA GTTTTAGCCT ATATAAGTTT ACAGATGAAC CAGAAGAATC TAATTTAGAT 
AAATACATTA AAGATTAA
 
Protein sequence
MENEFDIEFK NYLYQVLGKD NLQELESNDE DGECYLEVGS KLSIDLSEDM VSLLTDKDSL 
LVILRFPSEA KKSFRGVSKG KVDFGFQLFK REDFDINYDF VGFTLSIKDA VDYSDMRLDF 
NFTPEGFEFS EKMNYALNII AIDEKHIVRA MRHIRFPREL CKIIREYYLK ITREDYNREV 
ALEDLENLDA ILFDGITSKQ VEESFSLYKF TDEPEESNLD KYIKD