Gene CPF_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1106 
Symbol 
ID4201873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1262784 
End bp1263206 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content32% 
IMG OID638081987 
ProductMarR family transcriptional regulator 
Protein accessionYP_695552 
Protein GI110798563 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATG ATTCATTTGA AATAGCTATG CTGATAAAGG AAATTTATTC AAGTACCATG 
GGGAAAGTAA GTGAAGGACT TAAAGAAAGT GGACTTACTC ACCAACAAAT AACAGTGATT
AAACTTATAG CTCATAAGGG AAAGGTTACA GTTAAGGAAC TTTGTGATGA AATGTCCTTA
GCTAAGGGAA CTGTGTCAGG AATAGTGTCA AGACTTGAAA ATATGGGGTA TGTGGAGAAG
TTTAAGGATG AAAAGGATAA GAGAAATACA TATATAGTTT TCTCTAAAAA AGGAGTAGAC
TTTGCAAAAA CTTTTAGGTG TGATATAAAT AATAGCTTTG ATAGTGTATT TGAAAACTTT
ACCCATGAAG AGGTTAATGA AATAAGAGAG GTACTTTTAA AGCTTAGGGA TAAGATAAAG
TAA
 
Protein sequence
MNYDSFEIAM LIKEIYSSTM GKVSEGLKES GLTHQQITVI KLIAHKGKVT VKELCDEMSL 
AKGTVSGIVS RLENMGYVEK FKDEKDKRNT YIVFSKKGVD FAKTFRCDIN NSFDSVFENF
THEEVNEIRE VLLKLRDKIK