Gene CPF_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1097 
Symbol 
ID4201864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1252251 
End bp1252802 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content23% 
IMG OID638081978 
Producthypothetical protein 
Protein accessionYP_695543 
Protein GI110799004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000321947 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTATTA TTCTGTATTT ATCTTTCTTT CTAATAATTG CAATAAGTAT TTTCTTAGGT 
AGAGGAAAAA GCTTAGTAAA ACAAAAATTA TTTTTAACTT TATCCTCTTT CTTAATATTA
ATTGGAATAA TTACTTCATT TCTAATAAAA AGTATATTTT TAAATAACTT AAGAATCCAT
AATGAACTTT ATGATTATGT AAATCTTGAG TTTATAAATT GGGCCCTTAA TAAATTTAAT
TCTTACTTTA AATGGTCATA TTTATATGTC TTTATAGTCT TAGGAATTCT CTTATATAAT
CTATATACAG ATTATAATAT AAGGAATAGA GAAAACTTAA AACACTTTAA CTATATTTGT
GTAACATCTA TGGGAGTTAT ATTAACTGGT GCAATAATCT ATTCCTTTAG CTCCATAAAT
AAAGTCTTTG ACATACCATT ATATTTAGAG ATAACAGCTT TTTCTCAAAT ATTTATACTT
TATATTCCAC TAGTGGCAAT GAGACTTTAT ATAGGAAATC CAGAGGTTGA AAATACAGTA
TTTGAAGTAT AA
 
Protein sequence
MLIILYLSFF LIIAISIFLG RGKSLVKQKL FLTLSSFLIL IGIITSFLIK SIFLNNLRIH 
NELYDYVNLE FINWALNKFN SYFKWSYLYV FIVLGILLYN LYTDYNIRNR ENLKHFNYIC
VTSMGVILTG AIIYSFSSIN KVFDIPLYLE ITAFSQIFIL YIPLVAMRLY IGNPEVENTV
FEV