Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1097 |
Symbol | |
ID | 4201864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1252251 |
End bp | 1252802 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 638081978 |
Product | hypothetical protein |
Protein accession | YP_695543 |
Protein GI | 110799004 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000321947 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTATTA TTCTGTATTT ATCTTTCTTT CTAATAATTG CAATAAGTAT TTTCTTAGGT AGAGGAAAAA GCTTAGTAAA ACAAAAATTA TTTTTAACTT TATCCTCTTT CTTAATATTA ATTGGAATAA TTACTTCATT TCTAATAAAA AGTATATTTT TAAATAACTT AAGAATCCAT AATGAACTTT ATGATTATGT AAATCTTGAG TTTATAAATT GGGCCCTTAA TAAATTTAAT TCTTACTTTA AATGGTCATA TTTATATGTC TTTATAGTCT TAGGAATTCT CTTATATAAT CTATATACAG ATTATAATAT AAGGAATAGA GAAAACTTAA AACACTTTAA CTATATTTGT GTAACATCTA TGGGAGTTAT ATTAACTGGT GCAATAATCT ATTCCTTTAG CTCCATAAAT AAAGTCTTTG ACATACCATT ATATTTAGAG ATAACAGCTT TTTCTCAAAT ATTTATACTT TATATTCCAC TAGTGGCAAT GAGACTTTAT ATAGGAAATC CAGAGGTTGA AAATACAGTA TTTGAAGTAT AA
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Protein sequence | MLIILYLSFF LIIAISIFLG RGKSLVKQKL FLTLSSFLIL IGIITSFLIK SIFLNNLRIH NELYDYVNLE FINWALNKFN SYFKWSYLYV FIVLGILLYN LYTDYNIRNR ENLKHFNYIC VTSMGVILTG AIIYSFSSIN KVFDIPLYLE ITAFSQIFIL YIPLVAMRLY IGNPEVENTV FEV
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