Gene CPF_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1096 
Symbol 
ID4203797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1250901 
End bp1252049 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content26% 
IMG OID638081977 
Producthypothetical protein 
Protein accessionYP_695542 
Protein GI110799957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000113955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TAATTAATGA AATAAAGAAA CTTTTTAATT TAAAAATTCT ATTGATTCTT 
GGATTAATAG TTTTTATAAT ATGGAAAATA TTTATAAGTT TTTGGATAGA AGTTTTTCCA
AATGGTTCAG ACACACCAAC TTTTAATTTA AGCGTAGAAA TGCTTAAAGA TTATGGAACA
ACAATGGATG AAAAGGAATT TGAAGATTTT AAGGAAAAGT CAGCTTTAAG AGAAAAAGAG
GCAGACGAAT ATTTAAAGGG AGATAAAGAG GCACAAGAAC TTGGAATAAA ATCATATAGA
GAGCTAAGAG AAAGTTTAGA TAAGGGAAAA ACTGATGAAA AGGTTGATGA GCTTCATTCA
AAAATATATT TTGAGGATAA TGTATATTTA TTTTGGGAGA TGGGAACTAG AGAGTCTATA
ATATTGTCAT ATGAAGATTA TTTAAATAGA CACTATGGAT TAGATAGCAG TGAAACCAAT
AGGTACAAAA GGTTAGAAGA ACTTGAAAAA GGTGAGCAAC CAAAATCTGT TTTAAGTTAT
GTTACTTTTT TAAATTATGA TTCCTTAATA ACTAATTTTT CAATACTTGT TGTGGTGACC
TTAGCTTTTA TAATATCACC AATATTTTTA AGAGATGAAA AAAATAAAGT AAACCTTCTT
CAGTATTCAT CAAAAACTGG AAGAAAGATG GGGAGTAAAA AAGTTATTTC AGCTATGATA
ACTGCTTTTG GAATAAGTAC TTTGGAGTTA ATAGGGCTAT TTTTAATGTA TATTCCTAAT
GATACATTGC AATTTTGGAA TTGTAGCATA AATTCTAAAT TTAATTATAT GGTTTCTTGG
TTTGATTTAA CTTTTGGACA ATATATAATG TTAACTATTC TAGTTATATA TATAATAACT
TTTGTGGTAA CTAGCGTATC ATTATTTGTA AGTAGTAAAG TTAAAAGTTA TGTGGCATTA
ATAGGAGTAC AAGTGCCTAT TTTAGGAGCT TTAATAATGT TTTTAGATAA TATAGGACTA
AATCATATGA CCACAATAAA TTATCCTAAA TATATTCCTT TAATTGCTTA TGTAGTATTT
ATTATAATTT CAATACTTTT AATAATTAAC TTATCAAAAA ATGAAAAGAA TAGGGATGTT
TTAAATTAG
 
Protein sequence
MRIIINEIKK LFNLKILLIL GLIVFIIWKI FISFWIEVFP NGSDTPTFNL SVEMLKDYGT 
TMDEKEFEDF KEKSALREKE ADEYLKGDKE AQELGIKSYR ELRESLDKGK TDEKVDELHS
KIYFEDNVYL FWEMGTRESI ILSYEDYLNR HYGLDSSETN RYKRLEELEK GEQPKSVLSY
VTFLNYDSLI TNFSILVVVT LAFIISPIFL RDEKNKVNLL QYSSKTGRKM GSKKVISAMI
TAFGISTLEL IGLFLMYIPN DTLQFWNCSI NSKFNYMVSW FDLTFGQYIM LTILVIYIIT
FVVTSVSLFV SSKVKSYVAL IGVQVPILGA LIMFLDNIGL NHMTTINYPK YIPLIAYVVF
IIISILLIIN LSKNEKNRDV LN