| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1092 |
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| Symbol | |
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| ID | 4201893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1247365 |
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| End bp | 1247949 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638081973 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | YP_695538 |
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| Protein GI | 110798777 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000437413 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTTA CTGAAGATGG TGGGGTGAGA CGGATTAATG AAAAGAAATT AATAACCCTT
GTAAAAAAGA ATAATGATAA AAAAGCAGCT GGTGAAATTG TTAAGTTTTA TTATAAGGAG
ATATTTGCTT ATGTTTTTAG ACAAACCTCT AATGAGGAGT TATCTAAGGA TTTAACTCAA
GAAATATTTA TTTCTATGCT TAAATCCTTA GGGGGATTTG ATGATGAAAA GGCTTCCTTT
AGGACATGGC TTTATAAAAT AGCCAGTAAC AAGATAATCG ATAATTACAG ATCTACATAT
TATAAATATG TTACTGTTGT AGATGAATTT GAGGAAGGAT TAGTAGGATA TGAAAATGAT
TTGGAAGAAT CATTTCAGCT TAAGGAGGAT GCTAAGGAGA TATTAGAGAT TATTAATACT
TTAAATACAA GCATTCAGCA AATTTTAAGA CTAAAGATAT TTGGAGGAAT GACATTTTTA
GAGATTTCTT CTCTAATTGA TATGTCAGAA TCTACAGTTA AAACTAAATA TTATTCAAGT
ATTAAAAAGA TAAAGAAGAT ATTGGAGGTG AAGAAGAATG AATAG
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| Protein sequence | MNFTEDGGVR RINEKKLITL VKKNNDKKAA GEIVKFYYKE IFAYVFRQTS NEELSKDLTQ
EIFISMLKSL GGFDDEKASF RTWLYKIASN KIIDNYRSTY YKYVTVVDEF EEGLVGYEND
LEESFQLKED AKEILEIINT LNTSIQQILR LKIFGGMTFL EISSLIDMSE STVKTKYYSS
IKKIKKILEV KKNE
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