Gene CPF_1085 details

Gene Information

• Locus tag: CPF_1085
• ID: 4201892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1234935
• End bp: 1235414
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638081966
• Product: acetyltransferase
• Protein accession: YP_695531
• Protein GI: 110798776
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1247] Sortase and related acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000615227
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATACA AAATAAGATT TGCAGATAAA GAAGATTACA AGGTGATAAA TGAAATTATT 
AGAGAGGTAC ATGACTTACA TGTTAAAAAT AGACCAGATG TGTACAATGA AACTGATAAA 
CCCTTATCAG AAGAGGAATT TAAAGAAATT CTAGAGGATG ATAGATACAA GATGTTTTTA 
GTTCAGGAAA GAGAAAGTAA AGAGGTTGTA GCTTTTAGTC TTATACAAAT AGTAGGACCT 
AGAAACATAC CAATACTTAC TCCTGTAAAA ACTGCCTTAA TTGATACTTT TTGTGTTAAG 
GAAAAGTATC GTAAAAGAGG AATAGGAAAA TTTTTATTTC AGCATATTAT AAGTTTTGCA 
AAAAAAGAAG GAGTAAACAC ATTACAATTA GTTGTCTGGG AATTCAATAA AGGAGCTATT 
AAATTTTATG AAGCTTTGGG AATGAAAAAA AGAAATATAA GTATGGAATT AGCTTTATAG 

 

Protein sequence

MKYKIRFADK EDYKVINEII REVHDLHVKN RPDVYNETDK PLSEEEFKEI LEDDRYKMFL 
VQERESKEVV AFSLIQIVGP RNIPILTPVK TALIDTFCVK EKYRKRGIGK FLFQHIISFA 
KKEGVNTLQL VVWEFNKGAI KFYEALGMKK RNISMELAL