Gene CPF_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1033 
Symbol 
ID4203612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1183309 
End bp1183815 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content29% 
IMG OID638081914 
Producthypothetical protein 
Protein accessionYP_695479 
Protein GI110800272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT TTGAAAAAAC ACTTCTAAAA CACAATATAG GTTACTTAGA TGAGAGAGAT 
GAATATCAGC AAGGAGTAAT TTATGAAACC CTTGCAACGG CTAATTTATA CTTATCATAC
TTACTTATAA TTTGTATGGT AATTAGTCTT ATTTTTGATG GAATTAATCA TAGTCTAACC
TTTGGAACAT TTGCCTTAGC TGCCCTTCAA TTTGGGAACT CATGTTATAT TTTAAATAAG
CTGAAAAAAA GTGGAGCTTA TGAAACAGAG GTTTATGATG ATTATACTTA CAATATAGAA
ATTAAAAAAT TAAAAAAACA ATGTATAATA TCAGCAATAC AGTGGGGAAT ATTTATGTTT
TTTGTAATGA CATATCTTTG GCCATGGATT TTAGGGGATC CAATTAATGT AGGATTAAGA
CAAGTAATTG CTTGGACAAT TGGTGGAACT CTATTTGGAC TATTATGTTA TGCTATTTCA
AAATCAAAGA TAAAGAAAGT AGTGTAA
 
Protein sequence
MNKFEKTLLK HNIGYLDERD EYQQGVIYET LATANLYLSY LLIICMVISL IFDGINHSLT 
FGTFALAALQ FGNSCYILNK LKKSGAYETE VYDDYTYNIE IKKLKKQCII SAIQWGIFMF
FVMTYLWPWI LGDPINVGLR QVIAWTIGGT LFGLLCYAIS KSKIKKVV