Gene CPF_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1020 
Symbol 
ID4201915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1172294 
End bp1172719 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content32% 
IMG OID638081901 
Producthypothetical protein 
Protein accessionYP_695466 
Protein GI110801314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000136149 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA AAAATTTAGC AAACCAATTA GTAAAAAAAT ATGGATTAAG GGATCCATTA 
GAAATAACAT TAGCAAAGGG AATCATACTC TTAGAAGAAG ACTTAGGAGA AGTATATGGC
TATTCCCATA CCTATAAAAG ACAAAGCTTC ATCCACTTAA ATAAGAATTG TTTATTAAAA
ACAAAAAGGC TTGTATGTGC CCATGAATTA GGATACCTTC TAATTCACCC AAAAGAAGAA
ATACATGTTG TAACTGATTC CTCACTAGAA CCAAAGGATG ACTTTGAAAG GTATGCCAAA
ATCTTTGCTG CACACTTACT TATATCAGAT GAGATGGTAA AAGAGTATGA AGGAAAAAGT
GCTGAAGATA TTGCTAACTC CTTAAATCTG CCTTTGGATT TAGTTTTGAT TAGGTTAAAC
CCTTAA
 
Protein sequence
MNIKNLANQL VKKYGLRDPL EITLAKGIIL LEEDLGEVYG YSHTYKRQSF IHLNKNCLLK 
TKRLVCAHEL GYLLIHPKEE IHVVTDSSLE PKDDFERYAK IFAAHLLISD EMVKEYEGKS
AEDIANSLNL PLDLVLIRLN P