| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1017 |
|---|
| Symbol | dcm |
|---|
| ID | 4202877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1168761 |
|---|
| End bp | 1169984 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638081898 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_695463 |
|---|
| Protein GI | 110800293 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000173246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAG AAAAAACTGT ATGTGAACTG TTTGCAGGTG TTGGTGGATT CCACCTTGGA
TTAAGTAAAG CATCAGCAGA CTGGGAGGTT CTTTGGGCGA ATCAATGGGA ACCTTCAAGA
AAGGTACAGC ATGCATTTGA GTGTTATGCA AAGCATTTTC CAAAGACAAA TGCTGTTAAT
GAAGATATAG CTTTAGTAAA TGAAAATCCA GAGGCTTTTG GACTTCCAAA GTATAATTTA
CTTGTAGGTG GTTTTCCATG CCAAGATTAT TCAGTAGCTG CTACGAAGTC AAAAGGAATA
GAAGGGAAAA AAGGAGTTTT ATGGTGGGAG ATAAGAAAGT TTCTAGAAAG AGACATGCCA
CCATTTGTAC TTTTAGAGAA TGTTGATAGA TTACTAAAAT CTCCTGCAAA GCAAAGGGGA
AGAGATTTTG GAGTAATGTT AACTTGTTTT AGAGATTTAG GATACAATGT TGAGTGGAGA
GTTATAAATG CGGCAGATTA TGGATTCTCT CAAAGAAGAA GAAGAGTATT TATATTTGCT
TATAAACATG ATACTAATTA TTGTGAAAGA GTAACTCAAG GATTAGAAAA TGAGGGATTC
ATGGAAGCTT ATATAAAAGA AAATGGATTC TTTGCAGAAC CATTTCCTAT AGAAACTATA
TATGGTGAAG ATGAAAAAGT ATTAAATCAA GATATACTTG AGGTATCAGA TCATTTTTCA
TTTGGTTTCC AAGAATCAGG AGCATTAATA AATGATAGAA TTTATACAAC TAGATATACA
CCACAAAGTC AAGAACCAGT TACACTTGGT GAAATACTTC AAAAGGATGT AAGTGAAGAG
TTTTATTTAG GTGAAGAATT AGATAGATGG ACTTATATGA AGGGTGCTAA GGCAGAGCCT
AGAACAACTA AAGAAGGCTT TGAGTATATC TATAGAGAGG GAGCTGTTGG ATTTCCAGAT
AGTTTAGAGT TACCTGCAAG AACAATGCTT ACAAGTGAAG CTAGTGTAAA TAGAAGTACT
CATGTAGTAA AGGATCCACA AACTAATAGA TTAAGAGTAT TAACACCAGT AGAGTGTGAA
AGATTAAATG GCTTTGATGA TGAATGGACT AATACAGGAA TGACTCAGAA GTTTAGATAT
TTTTGTATGG GAAATGCATT GGTTGTTGGA TTAATTGAAA GAATGGGTAG AAAATTAGAT
AGAATATTTG AATTAGAAGA GTAA
|
|---|
| Protein sequence | MAIEKTVCEL FAGVGGFHLG LSKASADWEV LWANQWEPSR KVQHAFECYA KHFPKTNAVN
EDIALVNENP EAFGLPKYNL LVGGFPCQDY SVAATKSKGI EGKKGVLWWE IRKFLERDMP
PFVLLENVDR LLKSPAKQRG RDFGVMLTCF RDLGYNVEWR VINAADYGFS QRRRRVFIFA
YKHDTNYCER VTQGLENEGF MEAYIKENGF FAEPFPIETI YGEDEKVLNQ DILEVSDHFS
FGFQESGALI NDRIYTTRYT PQSQEPVTLG EILQKDVSEE FYLGEELDRW TYMKGAKAEP
RTTKEGFEYI YREGAVGFPD SLELPARTML TSEASVNRST HVVKDPQTNR LRVLTPVECE
RLNGFDDEWT NTGMTQKFRY FCMGNALVVG LIERMGRKLD RIFELEE
|
|---|
| |