| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1012 |
|---|
| Symbol | |
|---|
| ID | 4200996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1163290 |
|---|
| End bp | 1164111 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638081893 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_695458 |
|---|
| Protein GI | 110798932 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAATA AAAAGTGTAG AAGAATTATA GAGATTTTAT TTATATTATT ACTAATAGTA
CCGTCACAGC CTATTTATGC AAGAGCAGGA GGAGGCGGTG GAGGAGGTGG AGCTGGAGGT
GGTGGCTTTA TCTCATCAAG TGAAAGTGGT GGTGGAAAAG ATGGGGCCAG TGCCTTTGAT
TTTAAATTTA TTATGAAATA TAAACTTCTT TTTGGATCAG TAGCTTTTTT CTTGCTGTCT
GGAGGGGGAG TTTTAATGTT TGTGGAGATG GATAGGTATA GTAAAGTGGT TAAGCGTAAA
AGTGATAAGC TAAAGGAGTT AGCTTTAAAG GATACTTACT GGAATATTAA TTATATAAAA
TCTGTTGTGG AAGATACCTT TTATAGTATT CAGTATGCTT GGAATGATGA TGAATATGAA
AGGGTGGAGA GTTTACTTAC AACTTCATTA TATAATAAGC ACCTTAAGGT TTTAGAGGAG
CTTAAAAGTG AAAATAAGAA AAATGTTTTA GAGGATATTC AGTTTAAGGG GTGTAGAATA
ATAAGTCTCT TTGAGGGGGA TGAAAAGCAA TGGGGATTTA TTTGGGTTGA GGTTAATTTT
TCCATGAGGG ATTACATAGT TAATACAAAA GGGAAAAGAA GAGTAATAGA GGGAAATGAT
AATTATAGCA GAAGTGACTT TGAGTATTGG AAGTTTGTGT ATATTGAGAA TACATGGCTA
CTTTCAAATA TATTGCAGAA AAATGAGGTG GGTTCAGGCT ATAAGAAGTT ATATAGAGAG
GCTGAAAATG CCTATGGCTC TAGTAATATG AAGAAGGTTT AA
|
|---|
| Protein sequence | MRNKKCRRII EILFILLLIV PSQPIYARAG GGGGGGGAGG GGFISSSESG GGKDGASAFD
FKFIMKYKLL FGSVAFFLLS GGGVLMFVEM DRYSKVVKRK SDKLKELALK DTYWNINYIK
SVVEDTFYSI QYAWNDDEYE RVESLLTTSL YNKHLKVLEE LKSENKKNVL EDIQFKGCRI
ISLFEGDEKQ WGFIWVEVNF SMRDYIVNTK GKRRVIEGND NYSRSDFEYW KFVYIENTWL
LSNILQKNEV GSGYKKLYRE AENAYGSSNM KKV
|
|---|
| |