| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1005 |
|---|
| Symbol | fmt |
|---|
| ID | 4203845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1155215 |
|---|
| End bp | 1156168 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638081886 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_695451 |
|---|
| Protein GI | 110800003 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00554605 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG TTTTTATGGG GACTCCTGAT TTTGCAGTTC CCTCATTGAA GAAAATGATA
GAGAAATTTA ATGTAAGTGC CATTATAACA CAACCTGATA AGCCAAGTGG AAGAGGTAAA
AAGCTAACAA TTTCACCAAT CAAAGAAGTA GGATTATCTA ATGAAATTCC AATTTTTCAG
CCCGAAAAAA TAAGAACAGA CTCTGTAATC ATTAATAAAT TAAAAGAACT AAAACCTGAT
TTTATTATTG TTGTAGCATA TGGTCAAATA TTAACTAAGG AGATACTTGA TATACCAAGG
CTAGGATGTA TTTGTCTACA TGCCTCTCTC CTTCCAATGT ATAGGGGATC AGCACCAATA
AATTGGTGTT TAATAAATGG AGAAATAAAA ACTGGAAATA CAACCATACT AATGGATACT
AGTATAGATA CAGGTGATAT GCTCATGAGA AGTGAGGTTG AAATATCTGA ATCTATGACA
GCAGGAGAAT TATACAATTT ATTAAAAATA AACGGTGCTG AACTATTAGA AGAAACAATA
AATGGAATTA TAGCAGGTAA AATTTGTGGA ATAAAACAAC CCAATGATGG AAGTTCTTAT
GTAAAGATGT TAAACAAACA AATGGCAAAT ATTAATTGGA ATGACAGTAG TACTAACATA
CATAATTTAA TAAGAGGATT AAGTTCTTGG CCATATAAAA ATATAAACTC ATGGCCAACT
GCTTACACTT ACTATAAAGA TATTCCAGTT AAAATATTCA AATCTAAGTC ATTAGAGGCA
AATATTATTG ACCCGCCTGG TTATATTATA GATGCAAATG ATGAAGGAAT TAAAGTGGCT
ACCAAGAACG GCATTCTAAT TATAGAAATA TTACAGTTTC CAGGTGGAAA ACCTCTTGAG
GTAAAAGAAT TTTTAAAAGG AAATAAAATA GAAAAAGGCA TTATATTATC ATAA
|
|---|
| Protein sequence | MKIVFMGTPD FAVPSLKKMI EKFNVSAIIT QPDKPSGRGK KLTISPIKEV GLSNEIPIFQ
PEKIRTDSVI INKLKELKPD FIIVVAYGQI LTKEILDIPR LGCICLHASL LPMYRGSAPI
NWCLINGEIK TGNTTILMDT SIDTGDMLMR SEVEISESMT AGELYNLLKI NGAELLEETI
NGIIAGKICG IKQPNDGSSY VKMLNKQMAN INWNDSSTNI HNLIRGLSSW PYKNINSWPT
AYTYYKDIPV KIFKSKSLEA NIIDPPGYII DANDEGIKVA TKNGILIIEI LQFPGGKPLE
VKEFLKGNKI EKGIILS
|
|---|
| |