| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1002 |
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| Symbol | |
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| ID | 4203190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1152107 |
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| End bp | 1153333 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638081883 |
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| Product | amidohydrolase family protein |
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| Protein accession | YP_695448 |
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| Protein GI | 110799528 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000070505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAG AAGAATTACT AAAAGAAGCT AATTTACTTC AAGAAACTAT TGTTTCAAAC
AGAAGATATT TACACTCACA TGCTGAGACA GGATTTGATT TAAAAAACAC TCTTGCCTTT
GTAAAAAAAG AGTTAATTGA TATGGGCTAT GAGCCAATAG AATGTGGAAA AGCAGGACTT
ATTGCTTTAG CAGGTGGAAA AAAGGAAGGA AAGGTTTTCT TAATAAGAGG TGACATGGAT
GCCTTACCAA TTAAAGAGGA ATCAGATGTT GAGTTTTCTT GCCAAAGTGG AAAAATGCAT
GCCTGTGGCC ATGATATGCA CACATCTATG ATGCTTGGTG CTGCAAGATT ATTAAAAAAA
CATGAGGATG AAATTGAAGG AACTGTTAAA CTTATGTTCC AACCTGCTGA GGAAATTTTT
GAAGGTTCTA AGGATATGAT TAAAGCAGGA GTATTAGAAA ATCCAAAGGT TGATCAGGCA
CTAATGATTC ATGTAATGGC AGGAATGCCT TTTAATGCAG GTACTGTTAT TGTTCCTGTA
CCTGGAATTG GAGCTCCAGC TGCTGATTAT TTTGAAATAA AGGTTCAAGG AAAAGGATGT
CATGGTTCTA TGCCTAATAC TGGAGTTGAC CCACTTAATG TAGCTGCTCA CATTTTAATT
GCATTACAAG AAATTCATGC TAGAGAACTT GCCATAAGCG ATCAAGCAAT TTTAACAATT
GGAACAATGA ATGCTGGTAT TGCTGCCAAT GTAATCCCTG ACACAGCTAC TATGGGTGGA
ACTATTCGTA CTTTTGATGA AGAAACACGC TCATTTATAA AGGAAAGAAT TGAAGAAATT
GCAGAATGTA CAGCAAAATC CTTTAGAGCT TCAGCTGAAG TAATTTGGGG AAGTGGATGC
CCAACCTTAG TTAACGATAA AGACTTAACT GTATGCTCTG AAAAATACAT AAAAGAACTT
TTAGGGGAAG ATAAAACATT CTCTGTTGCC AAACTAAATG CCATGGCTGG AAATCAAAAA
TCTGCTAAAA CTTCTGGTTC AGAAGACTTT GCTTACATAA GCCAAAAAAT TCCTGCCATC
ATGTTAGTTT TAGCAGCTGG AAACCCAGAT AAGGGCTATC CATACCCTCA ACACCACCCA
ATGGTTAAAT TTGATGAAGA AGTTTTATCT AGTGGTAGTG CAGTTTACGC CTACACAGCA
ATGCGTTGGC TTCAAGACCA TAAATAA
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| Protein sequence | MKPEELLKEA NLLQETIVSN RRYLHSHAET GFDLKNTLAF VKKELIDMGY EPIECGKAGL
IALAGGKKEG KVFLIRGDMD ALPIKEESDV EFSCQSGKMH ACGHDMHTSM MLGAARLLKK
HEDEIEGTVK LMFQPAEEIF EGSKDMIKAG VLENPKVDQA LMIHVMAGMP FNAGTVIVPV
PGIGAPAADY FEIKVQGKGC HGSMPNTGVD PLNVAAHILI ALQEIHAREL AISDQAILTI
GTMNAGIAAN VIPDTATMGG TIRTFDEETR SFIKERIEEI AECTAKSFRA SAEVIWGSGC
PTLVNDKDLT VCSEKYIKEL LGEDKTFSVA KLNAMAGNQK SAKTSGSEDF AYISQKIPAI
MLVLAAGNPD KGYPYPQHHP MVKFDEEVLS SGSAVYAYTA MRWLQDHK
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