Gene CPF_0980 details

Gene Information

• Locus tag: CPF_0980
• ID: 4202470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1131187
• End bp: 1131705
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638081862
• Product: hypothetical protein
• Protein accession: YP_695427
• Protein GI: 110800723
• COG category: [S] Function unknown
• COG ID: [COG4283] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000378681
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGAACAT ATGAGAGTAA AGAAGAATTA AAAAAAGAAA TTGATAAGTA TTATAAAAAA 
TACATTGCTG AATTTGATAA TATACCAAAT GATTTAAAAG ATTCAAGGTG TGAAGAGGTT 
GATAGAACAC CTGCTGAAAA TCTTGCATAT CAAATTGGAT GGACAACTTT AATTTTGAAT 
TGGGAAAAGG ATGAAAAAGC TGGTTTAAAA GTAAAAACTC CATCGGATAA ATTTAAGTGG 
AATCAATTAG GGGATTTATA CAATTGGTTT AATGAAGAAT ATGCATTTCT TTCATTATCA 
CAATTAAAGC TTCTTTTAGC TGAAAATATA GAAAATATAT ATAAAATGAT AGATTCTATG 
TCAAATGATG AATTATTTAA ACCACATCAA AGAATATGGG CAGATGAAGC CACAAAAACA 
GCAGTCTGGG AAGTATATAA GTTTATTCAT GTCAATACAG TAGCTCCTTT TGGTACATTC 
AGAACAAAGA TAAGAAAATG GAAAAAGTTA ATGTTATAA 

 

Protein sequence

MRTYESKEEL KKEIDKYYKK YIAEFDNIPN DLKDSRCEEV DRTPAENLAY QIGWTTLILN 
WEKDEKAGLK VKTPSDKFKW NQLGDLYNWF NEEYAFLSLS QLKLLLAENI ENIYKMIDSM 
SNDELFKPHQ RIWADEATKT AVWEVYKFIH VNTVAPFGTF RTKIRKWKKL ML