Gene CPF_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0973 
Symbol 
ID4201722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1123253 
End bp1124281 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content29% 
IMG OID638081855 
Productglycosy hydrolase family protein 
Protein accessionYP_695420 
Protein GI110799675 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0331893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGTA GAAACAATAA TAATTTAAAA GGAATTGATG TATCAAACTG GAAAGGAAAT 
ATAAATTTTC AAAGTGTAAA AAATGATGGT GTAGAAGTAG TTTATATTAA AGCTACAGAA
GGTAATTACT TTAAGGATAA ATATGCTAAA CAAAATTATG AGAGAGCGAA AGAACAAGGA
TTAAGAGTAG GATTTTATCA TTTCTTTAGA GCTAATAAAG GAGCCAAGGA TCAAGCAAAT
TTTTTCGTAA ATTATTTGAA TGAAATAGGA GCAGTTAATT ATGATTGTAA ATTAGCTTTA
GATATAGAAA CTACTGAAGG GGTAGGAGCA AGAGATTTAA CTTCTATGTG TATAGAATTC
TTAGAAGAGG TAAAAAGAAT TACTGGAAAA GAAGTTGTTG TATATACATA TACAAGCTTT
GCAAATAATA ATTTAGATAG TAGATTATCC AGTTATCCAG TTTGGATAGC TCATTATGGT
GTAAACACTC CTGGAGCTAA CAATATATGG AGTGAATGGG TTGGGTTCCA ATATTCAGAG
AATGGAAGTG TAGCTGGTGT AAGTGGTGGA TGTGATATGA ATGAGTTCAC TAATGGAATA
TTCATTGATT CAAATAATTT TACTTTAGAC AATGCTACTA CTAAAAATGT AAGTATTAAA
TTAAATATAA GAGCTAAAGG AACTACTAAT TCTAAAGTAA TTGGTTCAAT ACCAGCCAAT
GAGAAGTTTA AAATAAAATG GGTTGATGAA GATTATCTTG GTTGGTATTA CGTTGAGTAT
AATGGAATAG TTGGCTATGT AAATGCAGAT TATGTAGAAA AGCTACAAAT GGCTACTACT
CATAATGTAA GTACTTTTTT AAATGTAAGA GAAGAAGGAT CATTAAATTC TAGAATAGTA
GATAAGATAA ATACAGGTGA TATTTTTAGA ATAGATTGGG TGGATTCCGA TTTTATAGGT
TGGTATAGAG TAACAACTAA AAATGGAAAA GTTGGATTTG TTAATGCTGA ATTTGTTAAG
AAATTATAA
 
Protein sequence
MQSRNNNNLK GIDVSNWKGN INFQSVKNDG VEVVYIKATE GNYFKDKYAK QNYERAKEQG 
LRVGFYHFFR ANKGAKDQAN FFVNYLNEIG AVNYDCKLAL DIETTEGVGA RDLTSMCIEF
LEEVKRITGK EVVVYTYTSF ANNNLDSRLS SYPVWIAHYG VNTPGANNIW SEWVGFQYSE
NGSVAGVSGG CDMNEFTNGI FIDSNNFTLD NATTKNVSIK LNIRAKGTTN SKVIGSIPAN
EKFKIKWVDE DYLGWYYVEY NGIVGYVNAD YVEKLQMATT HNVSTFLNVR EEGSLNSRIV
DKINTGDIFR IDWVDSDFIG WYRVTTKNGK VGFVNAEFVK KL