Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0973 |
Symbol | |
ID | 4201722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1123253 |
End bp | 1124281 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081855 |
Product | glycosy hydrolase family protein |
Protein accession | YP_695420 |
Protein GI | 110799675 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0331893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGTA GAAACAATAA TAATTTAAAA GGAATTGATG TATCAAACTG GAAAGGAAAT ATAAATTTTC AAAGTGTAAA AAATGATGGT GTAGAAGTAG TTTATATTAA AGCTACAGAA GGTAATTACT TTAAGGATAA ATATGCTAAA CAAAATTATG AGAGAGCGAA AGAACAAGGA TTAAGAGTAG GATTTTATCA TTTCTTTAGA GCTAATAAAG GAGCCAAGGA TCAAGCAAAT TTTTTCGTAA ATTATTTGAA TGAAATAGGA GCAGTTAATT ATGATTGTAA ATTAGCTTTA GATATAGAAA CTACTGAAGG GGTAGGAGCA AGAGATTTAA CTTCTATGTG TATAGAATTC TTAGAAGAGG TAAAAAGAAT TACTGGAAAA GAAGTTGTTG TATATACATA TACAAGCTTT GCAAATAATA ATTTAGATAG TAGATTATCC AGTTATCCAG TTTGGATAGC TCATTATGGT GTAAACACTC CTGGAGCTAA CAATATATGG AGTGAATGGG TTGGGTTCCA ATATTCAGAG AATGGAAGTG TAGCTGGTGT AAGTGGTGGA TGTGATATGA ATGAGTTCAC TAATGGAATA TTCATTGATT CAAATAATTT TACTTTAGAC AATGCTACTA CTAAAAATGT AAGTATTAAA TTAAATATAA GAGCTAAAGG AACTACTAAT TCTAAAGTAA TTGGTTCAAT ACCAGCCAAT GAGAAGTTTA AAATAAAATG GGTTGATGAA GATTATCTTG GTTGGTATTA CGTTGAGTAT AATGGAATAG TTGGCTATGT AAATGCAGAT TATGTAGAAA AGCTACAAAT GGCTACTACT CATAATGTAA GTACTTTTTT AAATGTAAGA GAAGAAGGAT CATTAAATTC TAGAATAGTA GATAAGATAA ATACAGGTGA TATTTTTAGA ATAGATTGGG TGGATTCCGA TTTTATAGGT TGGTATAGAG TAACAACTAA AAATGGAAAA GTTGGATTTG TTAATGCTGA ATTTGTTAAG AAATTATAA
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Protein sequence | MQSRNNNNLK GIDVSNWKGN INFQSVKNDG VEVVYIKATE GNYFKDKYAK QNYERAKEQG LRVGFYHFFR ANKGAKDQAN FFVNYLNEIG AVNYDCKLAL DIETTEGVGA RDLTSMCIEF LEEVKRITGK EVVVYTYTSF ANNNLDSRLS SYPVWIAHYG VNTPGANNIW SEWVGFQYSE NGSVAGVSGG CDMNEFTNGI FIDSNNFTLD NATTKNVSIK LNIRAKGTTN SKVIGSIPAN EKFKIKWVDE DYLGWYYVEY NGIVGYVNAD YVEKLQMATT HNVSTFLNVR EEGSLNSRIV DKINTGDIFR IDWVDSDFIG WYRVTTKNGK VGFVNAEFVK KL
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