Gene CPF_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0948 
Symbol 
ID4202851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1101226 
End bp1101693 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content33% 
IMG OID638081830 
Productphage terminase, small subunit 
Protein accessionYP_695395 
Protein GI110801082 
COG category[L] Replication, recombination and repair 
COG ID[COG3728] Phage terminase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA CACCAAAACA GAAGGCGTTT GCTGAATATT ATATTGAAAC AGGCAACGCC 
ACAGAATCAG CTATTAAGGC AGGATATAGT AAAAAGACAG CTAGGGTAAT AGGACAAGAG
AACTTGCTAA AACCTGCCTT GAAATCTTAT ATAGATGAAA AGATGAAAGA ATTAGAAAGC
AAAAGGATAG CTAAAGCAGA GGAAGTGCTA GAGTATCTAA CTAGAGTTCT AAGAGGAGAA
GAAACAGAAC AAGTAGTAGT TACTGAAAAT ATAGGTGATT TTATGAGTGA GGCTAAAGTT
GTTGATAAGG AAATTTCGGC TAAAGATAAA ATCAAAGCAG CAGAATTATT AGGTAAAAGA
TATAGATTGT TTGTTGATAA AGTTGAAAAG GATAGTAACG TAAATGTTAA TTCTACAACT
AAACTAGATT CTATACTTAA CCAGTTAAAG GATGATGACG ATGAGTGA
 
Protein sequence
MKLTPKQKAF AEYYIETGNA TESAIKAGYS KKTARVIGQE NLLKPALKSY IDEKMKELES 
KRIAKAEEVL EYLTRVLRGE ETEQVVVTEN IGDFMSEAKV VDKEISAKDK IKAAELLGKR
YRLFVDKVEK DSNVNVNSTT KLDSILNQLK DDDDE