Gene CPF_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0940 
Symbol 
ID4202569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1096403 
End bp1097116 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content31% 
IMG OID638081822 
Producthypothetical protein 
Protein accessionYP_695389 
Protein GI110799066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAG GATGGATAAA GCTTTATAGA AATATTCAAG AACATTGGAT ATGGCAAGAT 
CCACAAAAGT TAAAATGGTG GCTAGACATT CTTCTTCTAG CTAACCATAA GGAAAATAAA 
TTTTTGCTAG GGAATGAATT AATGGAAGTT GAGAGAGGGG AACATCACAC ATCAGAGTTA 
AAATTAGCCG AAAGATGGGG TGTATCAAAA ACAACAGTAA GAAAGTTCTT AAAGTTACTT 
GAAAGTGAAC AAATGATTGA ACTTAAAAAA TCGAAAAAGG GTACCACCTT GAAAGTTAGT 
AATTACAACG ATTATCAAGA TTTTTCAGAG GGTGAAAAAA CCATAAAAAA ACCACAAAAA 
AACCATAGCG TATACCACAA AGAAACCATA GAAGAACCAT ATGCTATACC ACAAAAAAAC 
CATGAGGTAT ACACAAACAA TAATGAAAAG AATGAGAAGA ATGAAAAAAA TGAGAAAGAA 
GGAGAAGAAG TAGTAAAATC AACCTCACCT CGTTCCTATC CTTCTCCTAG TCATAAATTA 
TTAGCTAATT ACTTAACAGA TGTATGTTAT AGAACTTTCT TTAACAATGC AGATATTGTT 
GAAGAAAATG AAGTTATAAA AATTAAACCA GAGAATGATT TTTCTAGAGG AGCTATTGAG 
AAGTATGTTC CAACACTAGA AATTCAAACT CATAAAAAAA TAGAGGTGAT TTAA
 
Protein sequence
MAEGWIKLYR NIQEHWIWQD PQKLKWWLDI LLLANHKENK FLLGNELMEV ERGEHHTSEL 
KLAERWGVSK TTVRKFLKLL ESEQMIELKK SKKGTTLKVS NYNDYQDFSE GEKTIKKPQK 
NHSVYHKETI EEPYAIPQKN HEVYTNNNEK NEKNEKNEKE GEEVVKSTSP RSYPSPSHKL 
LANYLTDVCY RTFFNNADIV EENEVIKIKP ENDFSRGAIE KYVPTLEIQT HKKIEVI