Gene CPF_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0911 
Symbol 
ID4201306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1075096 
End bp1076289 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content26% 
IMG OID638081793 
Productaminotransferase 
Protein accessionYP_695360 
Protein GI110799050 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00145799 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAC CATTTTCACC CCCAGATATT AGAGAAAAAG AAATTAATAA TGTAATTGAA 
GTATTAAAAT CAGGTTGGAT AACTACAGGA AATAAAACCA AAGAATTTGA AAGAAAAATA
GCAAAATATT GTGAAACTAA AAAAGCTATA TGCTTAAATT CAGCAACAGC TGGATTAGAA
CTTATTTTAA GAGTTTTGGA TATAGGAGAG GATGATGAGG TAATAACAAC AGCATATACT
TACACTGCGT CAGCAAGTGT AATAAATCAT GTTGGAGCTA AAATTGTTTT AGCAGATACT
TCAAAAGATA CCTATGAAAT AGATTATGAA AGATTAGAAA AATTAATAAA TGAGAGAACA
AAGGCAATAA TTTTAGTGGA TTTGGCAGGA ATACCTTGTG ATTATGATAA AGTGTTTGAA
ATTGTAAATT ATAAAAAGAA AAATTTTAAA GCCAAAGGTA TTATTCAAGA ATTTTTAGGA
AGAATTGCAA TTATATCAGA TGCTGCACAT TCTTTCGGAG CAATCTATAA AGGAAAAATA
AGTGGAAGTA TAGCAGATTT CACTAGTTTT TCATTTCATG CAGTAAAGAA TTTAACAACT
GCTGAGGGAG GGGCAGTAAC TTGGAATATT AAAGATAATG AATTAAATGA TATTTTATAT
AAAAAATTCA GTTTATTTTC TTTGCATGGT CAGACAAAAG ATGCTTTATC TAAAACTCAA
GTAGGAAATT GGGAGTATGA CATAGTCTCT TTAGGATATA AATTTAATAT GACAGATATA
ATGGCAGCAA TAGGGTTAGC ACAATTTGAA AGATATGATG AGATACTTAA ATATAGGAGA
AAAAATATTG AATTATACGA TAAATTATTA AATGTTGAAA ATATAAAAGT TTTAGATCAT
TTTAATAATA CATTAAAATC TAGTGGCCAT TTATATTTCA TAAATATAAA TGGAAAAGAT
GAAAATTTTA GAAATAATAT AATAAAGAAA CTTGCAGAAA GAGGGATTTC AACTAATGTA
CATTATAAGC CTTTACCTAT GTTTACAGCA TATAAAAAAT TAGGATTTAA AATTGAAGAT
TATAAAAATG CATATAATTT ATATAAAAAC GAAATAACTC TTCCTCTTAA TACTATATTA
ACAGAAAGTC AAATTGAATA TATATGTAAT GAGTTAAAAG GAGCTTTAAT TTAA
 
Protein sequence
MNIPFSPPDI REKEINNVIE VLKSGWITTG NKTKEFERKI AKYCETKKAI CLNSATAGLE 
LILRVLDIGE DDEVITTAYT YTASASVINH VGAKIVLADT SKDTYEIDYE RLEKLINERT
KAIILVDLAG IPCDYDKVFE IVNYKKKNFK AKGIIQEFLG RIAIISDAAH SFGAIYKGKI
SGSIADFTSF SFHAVKNLTT AEGGAVTWNI KDNELNDILY KKFSLFSLHG QTKDALSKTQ
VGNWEYDIVS LGYKFNMTDI MAAIGLAQFE RYDEILKYRR KNIELYDKLL NVENIKVLDH
FNNTLKSSGH LYFININGKD ENFRNNIIKK LAERGISTNV HYKPLPMFTA YKKLGFKIED
YKNAYNLYKN EITLPLNTIL TESQIEYICN ELKGALI