Gene CPF_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0885 
Symbol 
ID4201489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1050937 
End bp1052067 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content30% 
IMG OID638081767 
Productalcohol dehydrogenase, iron-containing 
Protein accessionYP_695334 
Protein GI110799615 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGT TTAAGATTAA GACAGAAATA CTTTTTGGAG AAGGAGCCTT AGATTACCTA 
AAGGAACTTA AGAATAAAAA AGTTTTTATA GTAACAGATC CTTTTATGGT TAAGTCAGGG
ACTATAGAAA AATTAACTAA TAACCTTACA TCATCTGAGG TTTTTGTATT TAGTGAAATA
GTTCCAGATC CACCTATTGA GTTAGTTGTA AGTGGAATAG AAATGCTTAA AGATTTTAAT
CCTGATGTTG TTATTGCTTT AGGGGGAGGG TCTGCTATAG ATGCAACTAA GGCAATAATA
GATTTTTCTA AAAAATTAGT TAAATTAAAT GATATTAAGT TTATAGCTAT ACCAACAACA
AGTGGTACAG GCTCAGAGGT AACTTCATTT TCCGTAATAA CAGATAAGCA AAAAGGAGTT
AAATATCCTT TAGTATCAGA TGAATTATTA CCAGACATAG CAATTTTAGA TCCAGAACTT
GTTAAAACAG TTCCAAATTT TATAACTGCT GATACAGGAA TGGATGTACT TACTCATGCA
TTAGAAGCAT ATGTTTCTAA AAATGCAACA GACTTTTCAG ATGCTTTAGC TGAAAAAGCA
GCTACTTTAG TTTTTAAATA TTTATTAAAA GCTTATGAAA ATGGAAATGA TATAGAAGCT
AGAGAAAAAA TGCATAATGC CTCATGTTTA GCTGGTTTAG CCTTTAATGA GGCTTCTTTA
GGAGTAAACC ATGGTATTGC CCATGTTTTA GGAGGAAAAT TCCATGTTCC TCATGGAAGA
ACTAACTCAA TATTATTACC ACATGTAATA GAATATAATG CAAACATAAC AAGCTATAAT
TCTAAGGAAT TTAGTGAAGC TGCAGAAAAA TATGCTAAAA TAGCTAAAAT GGTTGGATTA
CAAGGATCAA ATACTAGAGG ATTAGTAAAA AATCTTATAA ATGAAATTAA AAAGATGCAA
AAGGCAATGA ATATGCCTAC AACTTTAAGA GAGTGTAAAG TTAATTGTGA TGAACTAAAG
AGTTTAGAAA ATGAAATAGC TCAATTAGCA TTAAAGGATG CATGTACAGA AAGTAATCCA
AGAGTGCCAG ATGAAAATGA TATAATATCT ATTTTAAACA AAATTAAATA G
 
Protein sequence
MKRFKIKTEI LFGEGALDYL KELKNKKVFI VTDPFMVKSG TIEKLTNNLT SSEVFVFSEI 
VPDPPIELVV SGIEMLKDFN PDVVIALGGG SAIDATKAII DFSKKLVKLN DIKFIAIPTT
SGTGSEVTSF SVITDKQKGV KYPLVSDELL PDIAILDPEL VKTVPNFITA DTGMDVLTHA
LEAYVSKNAT DFSDALAEKA ATLVFKYLLK AYENGNDIEA REKMHNASCL AGLAFNEASL
GVNHGIAHVL GGKFHVPHGR TNSILLPHVI EYNANITSYN SKEFSEAAEK YAKIAKMVGL
QGSNTRGLVK NLINEIKKMQ KAMNMPTTLR ECKVNCDELK SLENEIAQLA LKDACTESNP
RVPDENDIIS ILNKIK