Gene CPF_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0884 
Symbol 
ID4203724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1050043 
End bp1050669 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content27% 
IMG OID638081766 
ProductDedA family protein 
Protein accessionYP_695333 
Protein GI110799826 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTTT TAGAGAGCTT TGTTAGCTTT ATAGTTTATT TGGCTAGCAC TTGTGGATAC 
GTAGGAATAT TTATATTAAA CATGCTTGAA TATGCTTGTT TGCCATTTCC AAGTGAAATT
GTATTACCTG CAATAGGTGC TAGTGTAGCA AGTGGTAAAT ATAGCATGAT ATATGCTTTG
CCAATATCCG TTATAGGAGG CGTAGTTGGC ACCCTAATAA GCTATTCAGT GGGAATGTAT
GCAGGAAAAA AAGTAATTTC ATTTGCTAAG AGAAAGCATA AAAAAAGTAA ATCTATATTT
GAAAAAATAG ATAGGTTATT TTCTAGGTAT GGCAAAATAA CAGTTTTCCT AGCTAGATTA
TTACCATTTA CAAGAACATA TATATCACTT TTTGCAGGAG CTGAGAAGGT TAATAAAATT
ATGTTTGTTA TATTTTCAGC TTTAGGTATA ACAATAATGG ATAGTTTCTA TCTTCTATTA
GGATATTTTG CATATGATAA TAAATCATTT ATAGAAAAAG CTTTAAGACA TTATTCAATA
GGATTAATAA TTATAATAGT AATAGCTATT TTTTCATATT ATATTTATAA AAATCTAAAA
TTAAAGAAAC TTAAAAAAGA GAATTAA
 
Protein sequence
MGFLESFVSF IVYLASTCGY VGIFILNMLE YACLPFPSEI VLPAIGASVA SGKYSMIYAL 
PISVIGGVVG TLISYSVGMY AGKKVISFAK RKHKKSKSIF EKIDRLFSRY GKITVFLARL
LPFTRTYISL FAGAEKVNKI MFVIFSALGI TIMDSFYLLL GYFAYDNKSF IEKALRHYSI
GLIIIIVIAI FSYYIYKNLK LKKLKKEN