Gene CPF_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0873 
Symbol 
ID4202083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1036945 
End bp1037487 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content30% 
IMG OID638081755 
Productacetyltransferase 
Protein accessionYP_695322 
Protein GI110799259 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00821598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA TTGTTAGAAA AGAGTTAGAA GAAGATCATA AAACAGTAGA GCTTTTAGTA 
GAAGAAGCCT TTAAAGATGC TGAGTACAGT GATCATATGG AACATGTTTT AGTTAGTAAA
CTTAGAAAGG GAGAAAACTT TATTGATGGT TTATCTTTAG TTGCTGAAAG AGAAGGGGAA
ATAGTAGGAC ACATATTATT AACTAAAGCT AATATAGAAA ATGAAACAGA AAAATATGAA
ACTTTAGCCT TAGCACCAGT TTCAGTGTTA CCTAAATATC AAGGTATTGG AATTGGAGGA
GAGCTTATAA GAGAAGGTAT GAGAATGGCT AAGGAACTTG GATATGATTC AATAATAGTT
TTAGGACATG ATAAATACTA TCCTAAATTT GGATTTAAAA AAGCTGGAGA TTTTGGAATA
AAAGCTCCTT TTGAAGTGCC AGAAGAAAAC TTTATGGCAA TAGAATTAAA TGAAGAAGCT
TTAAAAAATA TAAGTGGTGT TGTAAGATAT GCTAATGAAT TTTTAGCAGA TAATAATAAG
TAA
 
Protein sequence
MKVIVRKELE EDHKTVELLV EEAFKDAEYS DHMEHVLVSK LRKGENFIDG LSLVAEREGE 
IVGHILLTKA NIENETEKYE TLALAPVSVL PKYQGIGIGG ELIREGMRMA KELGYDSIIV
LGHDKYYPKF GFKKAGDFGI KAPFEVPEEN FMAIELNEEA LKNISGVVRY ANEFLADNNK