| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0865 |
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| Symbol | |
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| ID | 4203596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1029042 |
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| End bp | 1029605 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 638081748 |
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| Product | AgrB family protein |
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| Protein accession | YP_695315 |
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| Protein GI | 110800914 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.017781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAT TTTTAAAATC TGCTATAGAG TATTTAGCAA AAGATCTTGA CTTGGACAAA
GAATTATTAG AGCAAATTCA ATATGTTGTA ATTGTATTGA CCTTTGAATT TATTAAATGT
ATTTCTGTAA TTCTAATTGC TGGAATACTT GGATATTTCA AAGAGAGCTT AATAGTAATT
CTTAGCATGT GCTTTATAAA GCCATTTATT GGTGGATATC ATGAAGATAG CCAATTAAAA
TGTTTTATTG CAACATTAAT TATTACAACA AGTATAATCA TGCTTGTTAC TTTTAACAAG
CTAAATCTAT TTAGCATTGT TATTTTAAAT TTGTTTAGTA TTTTTAGTAT TTATAATAAA
GCTCCAGTAA TAGATAGTAG ATTTCCATTG ACTAAAGAAC ATTTAATTAA AAAAAATAAA
ATATTAAGTG TTACAAACTC AAGTATTCTT TTTTTAATAA CCTTAATATT TTTCAAAATT
TCATGGATTT CTCAAACAAT AACGTGGACT TTATTAATAC AAACATTACT ATTATTTAAT
AAGTATAAAA GGGAGGATTC TTAA
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| Protein sequence | MRKFLKSAIE YLAKDLDLDK ELLEQIQYVV IVLTFEFIKC ISVILIAGIL GYFKESLIVI
LSMCFIKPFI GGYHEDSQLK CFIATLIITT SIIMLVTFNK LNLFSIVILN LFSIFSIYNK
APVIDSRFPL TKEHLIKKNK ILSVTNSSIL FLITLIFFKI SWISQTITWT LLIQTLLLFN
KYKREDS
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