Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0861 |
Symbol | alr |
ID | 4202182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1025324 |
End bp | 1026484 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081744 |
Product | alanine racemase |
Protein accession | YP_695311 |
Protein GI | 110798951 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATAT GTGTTAGACC TGTATGGGCT GAAATAGATT TAGATATAAT AGCAAATAAT ATGAAAGAAA TAAGAAACCT AGTTGGTGAA AAGGAAATAA TAGCCGTTGT TAAGGCTAAT GCTTATGGTC ATGGAGCTTT AGACATAGCT TCCACTCTTT TAGAAAATGG TGCTTCTAGA TTGGCAGTAG CTATAATCAC AGAGGCTGAT GAACTTAGGG ATGCTGGAAT AACTGCACCT ATTATGATTT TAGGTTATAC TCCTATAAAT TTTGCTGAAA ATTTAATCAA TAATGAAATT GAACAAACAG TTTATGATGT GGAATATGCT AAGGAATTAT CTGACTTTGC CTTAAAGCTT GGCAAAAAAG CTAAAGTACA CATTGCAATA GATACAGGAA TGGGTAGAAT AGGCTTCCTT CCAAATGAAG AGGGATTAAA TAAAGTTTTA GAAATCTGCT CTTTACCTGG AGTTGAGGTA ATAGGCCTAT TTACTCACTT CTCAACATCA GATGAAAAAG ATAAAACTTA TACTTATGAA CAATTTTCAA AATTAACTGC TTTTAATAAA GCTTTAGAAG ACAATGGAAT ACACATTCCT TTAAAACATG CTTCTAATAG TGGGGCTATT ATGGATTTAC CAGAAACTTA TTTAGACGGA GTTAGATGTG GAATTATTTC TTATGGATAC TATCCATCTG AAGAAGTAAA AAAAGAAAAC TTAAAACTTA AACCAGCACT TACATTAAAA ACTAATGTAG CCTTTGTTAA AGAGTTAGAT GAAGATATGT ATGTAAGCTA CGGAAGAACT TATAAAACTG AAAAGAAAAG TAAAATTGCC ACTCTTCCAA TAGGATATGC TGATGGATAC TCAAGACTTC TTAGTGGGAA AGCCAAAGTT ATAATAAAGG GTCAATTTGC TAATGTTATA GGAAGAGTTT GTATGGATCA ATGTATGATT GATGTAACTC ATATAGAAGA TGTTAAAATT GGCGATGAGG TAATTCTTTT AGGGGAAGAA AATGGATTAA AATTTGATGC TAACGATATG GCTGAAATTA TGGGAACAAT AAACTACGAA ATACTTTGTA TGATCAGCCA CAGAGTTCCT AGAATATATA AAAAGAATAA TGAAATAGTT AAGGTAATAA ACTATATTTA A
|
Protein sequence | MDICVRPVWA EIDLDIIANN MKEIRNLVGE KEIIAVVKAN AYGHGALDIA STLLENGASR LAVAIITEAD ELRDAGITAP IMILGYTPIN FAENLINNEI EQTVYDVEYA KELSDFALKL GKKAKVHIAI DTGMGRIGFL PNEEGLNKVL EICSLPGVEV IGLFTHFSTS DEKDKTYTYE QFSKLTAFNK ALEDNGIHIP LKHASNSGAI MDLPETYLDG VRCGIISYGY YPSEEVKKEN LKLKPALTLK TNVAFVKELD EDMYVSYGRT YKTEKKSKIA TLPIGYADGY SRLLSGKAKV IIKGQFANVI GRVCMDQCMI DVTHIEDVKI GDEVILLGEE NGLKFDANDM AEIMGTINYE ILCMISHRVP RIYKKNNEIV KVINYI
|
| |