Gene CPF_0859 details

Gene Information

• Locus tag: CPF_0859
• ID: 4203371
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1018485
• End bp: 1024772
• Gene Length: 6288 bp
• Protein Length: 2095 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 638081742
• Product: alpha-N-acetylglucosaminidase family protein
• Protein accession: YP_695309
• Protein GI: 110800516

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTATG TTTTAGCAAG TACTTTTGTA TTTGGATTAG TTAATCCAAG TGCAATTAAG 
GTAAGGGCAT CAACTGGTGT TGAAATTACG GAAGGGGTTA CTGTAACTGC AAAGGGAAAT 
ACTGAGGGCA ATACAGCTGA TTTAGCCATA GATGGTGATT TATCTACCTA TTGGGAATCT 
TCAAATGATT ATAAATGGAT AGAAGTTGAC TTAGGTGGAA TTTACGAATT ATCAAAAATT 
GAAATATTTA ATAAGGATGA AGCTGTTTAT AAATATAATA TATATGCTTC AGAAGATGGA 
GAAAACTTTA ATAAAATAGC ATATAAAAAT AATGATAATG TATCAGACAG TAATGGTAAT 
ATGCATACCA TTGATAACGT AAGGGCAGGA AAGATTAGAA TTGATGTAGT CCAAAATAGT 
AATAGTGATA GGGTGAATAT AGCTGAAATA AATGTATTTG GTAAAAATAC AGGAGAGAGT 
TTACCGGAAG TTAAGAAAAT TGCTACAAGT AATTTTAGTG AAACCCCTTG GGCTACTGAA 
TATGAAAAGT TTAATAGTGA TAGTGCCTAT GCCAATGAAA AAACTTTAAA TGAAATAAAG 
AATTTAGTTG GTAGAGTAAT AGGAAGAGAA TTTAAAGACA AGTTTATTTT TGAAATAAGA 
GATCAATTAA ATGGAAATGA TGTTTTTGAG GTTTCTGATT CAGGAGATGG AAAGGTTTTA 
ATAAAGGGGA ATAATGGTGT TTCCTTAGCA TCAGGATTTA ACTATTATTT AAAAAATTAT 
TGTAATGTAA GTTACAATCC AATAATGGGG TCTAATTTAA AAATGCCTGA AACAATGCCT 
TCTGTTGGGG AGAGAGTAGT TATAGATACT CCATATGAGC ATAGATATGC ATTAAACTTT 
TGTACCTATT CTTATACAAT GTCTTTCTGG GATTGGGATC AATATGAAGA ATTCCTAGAT 
TGGTGTGCTA TGAATGGGGT TAACTTAGTT TTAGATATAA TTGGACAAGA AGAGGTTTTA 
AGAAGAACCT TAAATGAATT TGGATATAGC GATGAAGAGG TTAAAGAATT TATTTCAGGA 
CCTGCATATT TTGCTTGGTT CTATATGCAA AATATGACTG GATTTGGAGG TCCACTTCCT 
AACGATTGGT TTGAGCAAAG AGCAGAGCTT GGAAGAAAAA TGCATGATAG AATGCAAAGT 
TTTGGAATAA ATCCTGTTCT TCAAGGATAC TCAGGTATGG TTCCAAGAGA CTTTAAGGAA 
AAAAATCAAG AAGCACAAAC TATTTCTCAA GGGGGATGGT GTGGCTTTGA TAGACCAGAT 
ATGCTTAAAA CATATGTAAA TGAAGGGGAG GCAGATTATT TCCAAAAGGT TGCAGATGTT 
TTCTATGAAA AGCAAAAAGA AGTGTTTGGA GATGTAACTA ACTTCTATGG AGTAGATCCA 
TTCCATGAGG GAGGAAATAC TGGTGATTTA GATAATGGAA AGATATATGA AATAATTCAA 
AATAAGATGA TAGAGCATGA TAATGATGCA GTTTGGGTTA TACAAAACTG GCAAGGAAAT 
CCTAGTAATA ATAAGTTAGA AGGATTAACT AAAAAAGACC AAGCTATGGT ATTAGATCTT 
TTCTCAGAGG TAAGTCCAGA CTGGAATAGA TTAGAGGAAA GAGATTTACC ATGGATTTGG 
AATATGCTTC ATAATTTTGG AGGAAGAATG GGAATGGATG CAGCACCAGA AAAACTTGCA 
ACAGAAATTC CTAAAGCCTT AGCTAATTCA GAGCATATGG TTGGTATAGG TATTACACCA 
GAGGCTATAA ATACAAATCC TTTAGCGTAT GAACTTTTAT TTGACATGGC TTGGACTAGA 
GATCAAATAA ACTTTAGAAC ATGGACTGAA GATTATATTG AAAGAAGATA TGGTAAGACT 
AATAAAGAGA TTTTAGAGGC TTGGAATATT ATATTAGACA CTGCTTACAA AAAGAGAAAT 
GATTATTACC AAGGTGCTGC TGAGTCTATT ATAAATGCAA GACCAGGCTT TGGAATAAAA 
AGTGCTTCAA CTTGGGGACA TTCAAAAATA GTTTATGATA AGAGTGAATT TGAAAAAGCT 
ATTGAAATAT TTGCAAAGAA CTATGATGAA TTCAAAGATA GTGATGCATT CCTTTATGAC 
TTTGCTGATA TATTAAAACA ATTATTAGCT AACTCAGCTC AAGAATATTA TGAGGTTATG 
TGTAATGCTT ATAATAATGG AAATGGAGAG AAATTTAAAT TTGTTTCAGG AAAGTTTTTA 
GAACTTATAA AGCTTCAAGA GAGAGTATTA TCAACTAGAC CTGAATTCTT AATAGGAAAT 
TGGATTGAAG ATGCTAGAAC TATGCTTAAG GACTCTGATG ATTGGACTAA GGACTTATTT 
GAATTTAATG CTAGAGCTTT AGTAACAACT TGGGGTTCAA GAAATAATGC TGACGGTGGT 
GGGCTTAAAG ATTATTCTAA TAGACAATGG TCAGGATTAA CTGAGGATTA TTATTATGCT 
AGATGGGAAA AATGGATAAA TGGATTACAA GCTGAATTAG ATGGAGGAGC TAAAGCCCCT 
AATATAGATT GGTTTAAGAT GGAGTATGAC TGGGTAAACA AGAAGAGTGA TACAGATAAG 
CTTTATCCTA CAGAAGCTTC TAATGAAAAC TTAGGAGAAC TTGCTAAGAT AGCCATGGAA 
AGTTATTCAG TAACTAATAT GGATAAAATA TTAGGTGAAA ATGAATCAGT TGAAAGAGTT 
AATATTGCTT TAGGAAAGCC TGTAAGTAGT GAAACTCATG AAGAAACTGA AGCCGATCCT 
TTAAGTAACA TTACAGATGG AAATACAGGA ACTATGTGGA TTGCTGATAG GGAGGGATAT 
CCTGCAAGTG TAACTGTAGA TTTACAAGGA GTTAAAAGTG TAGATGGAAT AGAATTTGCT 
TTTAGAAATC AGGCTGGTGA TAGGGCTGTA GCATACAAAG TAGAGGTTAT GGATGAAAGT 
GGACAGTGGA AAATAGTATC AGATAAATCT GAGGATTATT CTAGTAAGGG AGTCATTGAA 
AAGGTTGATT TTACTGGAAA GGCTCAAAAA GTTAAGGTTT CATTAACTAA TGTAGATTTA 
AACCTAAGTC CATCATATAA AATACCAGAA TTAGCAGAAA TAATGGTATA TGGAGGAAAA 
GAAAAGGAAG ATGAGTATAC TAACGTTGCT TTAGGAAAAA CAGTTACTGG AGCAGAGGCT 
GAAAATGGAA AATCATTATC TAATATTACA GATGGAGATT TAAATTCTCT TTGGGTTAGT 
AATGGTGGAA AAACTCCAGC AACTACATCT ATCGATTTAC AAGGAACAGA AAATGTTGAG 
TTCTTAGAGC TTCACTTTGA AAAGCCAGGA CTTAGATTCC AATTTAAAGT AGAAGTAGAA 
GATGCAAATG GAAATAAAGA AAATGTATTA GATATGACTT CAAATAAAGA AGATAATGAA 
AAATCATATA AAATACCTGT AGGAAAAGAT ATAAATAAAG TTCATGTTAC TATGACAGGA 
AAAGCAGAAG GTGGACAACA TCCAGGAGCT TGGGCAGCTA TTGCAGAAGT AAAGGCCATG 
TCAAAAGAAA AACCAGCTAA TTATGTAAAT ATAGCAGAAA ATAAAAATGT AAGTGGTTCT 
AATTCTCAAA GTGGAAATCC TTTATCTAAT ATTACAGACG GAGATTTAAG TTCCCTTTGG 
ATAAGTGATA ATGGAGCTAT GCCAGCTAAT GCCACAATTG ACTTAGAAGG AAATAATTTT 
GTAGATTTCT TAGAGCTTCA TTTTGAAAAG GAAGGATTTA GATTCCAATT TAAAGTGGAA 
GTTGAAGATG AGAGTGGAAA TAGAGAAACA GTATTGGATA TGACTTCTAA TACAGAGGAT 
AATAAAAAGT CATATAATAT TCCTGTAAAA AAAGAAATAA GTAAAATACA TGCTACTATT 
ACAGGAAAAG CTCCAGGTGG TTCATTTGAT CAAGCTTGGG CAGCTATTGC AGAAATTAAA 
GCTATGAGTA AAGAGGCTAT AAATAAAGTT GAACAAGCTT CCATAGCATT ACCTCAAGGA 
AATATGAAAG CTACAGCAAC ATCAGAGCAT CCTGATGTAG GAAATGAAGG CTTAGCTAAG 
TTTGCTATTG ATGGAAAGGA AAATACTATA TGGCATACAA AATATAATCC TGTAGAAGAG 
TTACCACAAA GTATTACTTT AGAACTTGGA GGGAGTTACG AAATTAATAA GTTTACTTAC 
TTACCAAGAA GTGGTGCTAA AAATGGAAAT ATAACTAAAT ATGAGCTTCA TGTAAGTGAG 
GATGGAAATA ATTTTAGAAA AATATCTGAA GGAAATTGGG ATGATAGTGG AAGTTTAAAA 
ACATTAAAAT TTAATAGTAC AAAGGCAACT CATGTTAAAC TTGTAGCTTT AGAAGGGGTT 
GGAGGATTTG CTTCAGCTGC TGAATTAAAT GTATTTGCAA TTCCAGAAAA CCTAGCTATG 
AAAGATGAAA CTAAGGTTGA GGTAACTTCA AATAATTCTG AAGCAAATAA TTTAAGAGAT 
GGAAATGAAA ATACTCTTTG GGTTCCAGGA CAAGAAGAGG AAAAGTCTGT AACTTTTGAT 
TTAAGTAAGG AAAAGGATAT ATCCGCAATA GATATAGTAA GCAAGGGAAA TTCTCCATTA 
AAATACTCTA TAGAGATTTC TAATGATGGA ACAGAATGGA CAAAGATAGT TGATGAGAAC 
AACAATGAAG AGAATAAAGC TGTATATTCT AATATATTAA AGTCAGGAAA AATAGGAAGA 
TTTGTAAGAT TTAATTTTAA TAGTGAGAAT GTTAAAATTG GAGAAATCAA AATTTATAAA 
GGAGATTCTA CTTCAAGTTT AGCTTCTTAT ATAAGAGTAG TTGAAGATAT ATATAATAGT 
GCAGTAGTTG GGGATATGGC TGGAAACTAT ACTGAAGAGG CTAAGGAATC CCTTGGAAAT 
GCTATAAATG AGGCAAAATT AGCTTTAGGA AATGATATAA ATTCAAAAGA GGCTAATGAA 
GTTATGAGCA CTTTAAAATC AGCTTTAAAT GAATTCTATA AGGGATTTGT TCAAATAAAC 
AGAACTAAAC TTGCAGCTTT AATAAGTGAT GTTGATATTT TACTAAATGA AATATTACCA 
AGTCTTATGA ATAGCATGAA CTATAATGAA AAAGCTATAG TAAATGCAGA AATTCAAAAG 
CTAAAGTTAG AAAATAATGA GGCTAAAGAA GTTTACAATA AAAAGCAAGT TTCACAAAGT 
GAAATAGACA CAGCTTATGA TGAGTTAAAA AATACATTAG ATTCATACTA TGATGCTGTA 
AGTGCTGAAA CTGCATATAA ATCAATGGTA CTTTTAGCTA AGGAAAAAGT AGAAAATGCA 
GTAGTGGGAA ATGGAAATGG ACAGTATCCT AAGGAAGCTG TAGATGCTTT AAATGAAGCT 
ATAAGAATTG CTGAGGAAGG TTTTGAAAGT TCTACAAGCT TAGAAGAGAT TAGAAATATA 
ACAAAGACTT TAAAAGAAGC TATAGATACT TTCGTTGAAT CAGTTAATGT AATTGATAAA 
GCACAATTAG AAGAGATAAT ATCTTCAATA GAAAGTAAAT TAGAAAATGC AGAAGGAGTA 
TATATTCCTA ATGCTATAGA AGAACTTAAA AAAGCTTTAG ATAAAGCTAA GGAGGTATTA 
AACAATGAAG GTGCAAATGA AGAGGATATA AATAAGGCTA TCTCTGATTT AACTGAAGCA 
GAAGCTAATT TTGAACTTTC AAAAGTTCCT AATAAAGATG AATTAAATTC TGAGATAGAA 
AGAGCATATG ATGTTTTAGA AAAACTTAAA GGATTTGAGC ATCTTGAAGG AATAAAAATA 
AAGTTAGAAG ATGCTATTTT AGAGGCTGAA AGAGTTAAAA ATGATGAAAA TTCATTAAAA 
GTAGATGTGG ATAAAGTTTT AGGTGAATTA AAGATTGTAA TAGAAGAAGC TTTAAAAGCT 
ATTGATTCCT CAGAAGTTAT AGTATGCCCA GTAAGAGATT TTAAAGCAAC TAATATTTCA 
AAGAAAACTG TAACTGTTCA GTGGAGCGCA CCTGAAAATT CATTTGGATT AGAAGGATAC 
GTACTATATA AAGATGGTAA AAAAGTAGCT GAATTAGGAA AAGATGAGAC TACCTATAAG 
TTTAAAGGAT TAAATAGACA TACTATATAT AACTTTAAAA TTGCAGCAAA ATATAATAAT 
GGAGAGCTTT CTTCAAAAGA ATCCATAACT TTAAGAACTG AAAGATAA 

 

Protein sequence

MAYVLASTFV FGLVNPSAIK VRASTGVEIT EGVTVTAKGN TEGNTADLAI DGDLSTYWES 
SNDYKWIEVD LGGIYELSKI EIFNKDEAVY KYNIYASEDG ENFNKIAYKN NDNVSDSNGN 
MHTIDNVRAG KIRIDVVQNS NSDRVNIAEI NVFGKNTGES LPEVKKIATS NFSETPWATE 
YEKFNSDSAY ANEKTLNEIK NLVGRVIGRE FKDKFIFEIR DQLNGNDVFE VSDSGDGKVL 
IKGNNGVSLA SGFNYYLKNY CNVSYNPIMG SNLKMPETMP SVGERVVIDT PYEHRYALNF 
CTYSYTMSFW DWDQYEEFLD WCAMNGVNLV LDIIGQEEVL RRTLNEFGYS DEEVKEFISG 
PAYFAWFYMQ NMTGFGGPLP NDWFEQRAEL GRKMHDRMQS FGINPVLQGY SGMVPRDFKE 
KNQEAQTISQ GGWCGFDRPD MLKTYVNEGE ADYFQKVADV FYEKQKEVFG DVTNFYGVDP 
FHEGGNTGDL DNGKIYEIIQ NKMIEHDNDA VWVIQNWQGN PSNNKLEGLT KKDQAMVLDL 
FSEVSPDWNR LEERDLPWIW NMLHNFGGRM GMDAAPEKLA TEIPKALANS EHMVGIGITP 
EAINTNPLAY ELLFDMAWTR DQINFRTWTE DYIERRYGKT NKEILEAWNI ILDTAYKKRN 
DYYQGAAESI INARPGFGIK SASTWGHSKI VYDKSEFEKA IEIFAKNYDE FKDSDAFLYD 
FADILKQLLA NSAQEYYEVM CNAYNNGNGE KFKFVSGKFL ELIKLQERVL STRPEFLIGN 
WIEDARTMLK DSDDWTKDLF EFNARALVTT WGSRNNADGG GLKDYSNRQW SGLTEDYYYA 
RWEKWINGLQ AELDGGAKAP NIDWFKMEYD WVNKKSDTDK LYPTEASNEN LGELAKIAME 
SYSVTNMDKI LGENESVERV NIALGKPVSS ETHEETEADP LSNITDGNTG TMWIADREGY 
PASVTVDLQG VKSVDGIEFA FRNQAGDRAV AYKVEVMDES GQWKIVSDKS EDYSSKGVIE 
KVDFTGKAQK VKVSLTNVDL NLSPSYKIPE LAEIMVYGGK EKEDEYTNVA LGKTVTGAEA 
ENGKSLSNIT DGDLNSLWVS NGGKTPATTS IDLQGTENVE FLELHFEKPG LRFQFKVEVE 
DANGNKENVL DMTSNKEDNE KSYKIPVGKD INKVHVTMTG KAEGGQHPGA WAAIAEVKAM 
SKEKPANYVN IAENKNVSGS NSQSGNPLSN ITDGDLSSLW ISDNGAMPAN ATIDLEGNNF 
VDFLELHFEK EGFRFQFKVE VEDESGNRET VLDMTSNTED NKKSYNIPVK KEISKIHATI 
TGKAPGGSFD QAWAAIAEIK AMSKEAINKV EQASIALPQG NMKATATSEH PDVGNEGLAK 
FAIDGKENTI WHTKYNPVEE LPQSITLELG GSYEINKFTY LPRSGAKNGN ITKYELHVSE 
DGNNFRKISE GNWDDSGSLK TLKFNSTKAT HVKLVALEGV GGFASAAELN VFAIPENLAM 
KDETKVEVTS NNSEANNLRD GNENTLWVPG QEEEKSVTFD LSKEKDISAI DIVSKGNSPL 
KYSIEISNDG TEWTKIVDEN NNEENKAVYS NILKSGKIGR FVRFNFNSEN VKIGEIKIYK 
GDSTSSLASY IRVVEDIYNS AVVGDMAGNY TEEAKESLGN AINEAKLALG NDINSKEANE 
VMSTLKSALN EFYKGFVQIN RTKLAALISD VDILLNEILP SLMNSMNYNE KAIVNAEIQK 
LKLENNEAKE VYNKKQVSQS EIDTAYDELK NTLDSYYDAV SAETAYKSMV LLAKEKVENA 
VVGNGNGQYP KEAVDALNEA IRIAEEGFES STSLEEIRNI TKTLKEAIDT FVESVNVIDK 
AQLEEIISSI ESKLENAEGV YIPNAIEELK KALDKAKEVL NNEGANEEDI NKAISDLTEA 
EANFELSKVP NKDELNSEIE RAYDVLEKLK GFEHLEGIKI KLEDAILEAE RVKNDENSLK 
VDVDKVLGEL KIVIEEALKA IDSSEVIVCP VRDFKATNIS KKTVTVQWSA PENSFGLEGY 
VLYKDGKKVA ELGKDETTYK FKGLNRHTIY NFKIAAKYNN GELSSKESIT LRTER