| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0857 |
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| Symbol | |
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| ID | 4201318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1016461 |
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| End bp | 1017837 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081740 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_695307 |
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| Protein GI | 110798712 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATAA CTAGAGACAA AAGATTTTAT AGGTTACTTT TTAGTATTGC TTTGCCAATA
GCAGTACAAA ATTTAATAAC CTTTATGGTA AGTATGGTAG ATACTTTGAT GGTTGGAGCT
TTGGGGGAAA TTCAACTATC AGCAGTTTCT ATAGCTAATA ATTTATTTTT TGTACTTACA
ATTTTAATGT TTGGACTAGC TGGGGGATCT AATATTATGA TTTCTCAGTA TTGGGGAAAG
GGAAATGTAA AAACAATTCA TAAGATTTTG GCCATAATGT ATAGGGTGTG TTTATTAATA
ACTGGTATTT TCATATTTAT AGCATTATTT TTACCAAAAT ACTTTATGGG AATTTTCACA
ACTGATAAGG CTGTTATAGA TTTTGGAGCA AGTTATTTAA GAATTGTGTG CATAGGATAT
TTGTTCTATT CTATTACAAA CTGTACAATA ATGATGCTTC GTTCAGTAAA AACTGTTAGT
ATATCAATTA TAGTTTATAC TGCTTCTTTA GTGGTAAATT CAATATTAAA CTGGATTTTT
ATATTTGGAA ATTTAGGTGC TCCCGAACTT GGAATAAGAG GAGCTGCCAT AGCTACTGTC
TGTGCTAGAA TTACTGAGTT TTCAATAGTT TTAGTGTTTA TGTTTATATA TGAAAGAAAG
ATTGGTCTTA AAATAGAACA TTTATTAAAG CTAGATAAAG AGATTTTAAA AGATTATGTT
GGATTATGTA CTCCTGTCTT ATGTAATGAA TTACTTTGGG CAATTGGAGC TTCTATGATA
TCTGTAATAG TTGGTAGAAT GGGAACAGAG GTTGTAGCTG CTAATAGTAT AAATGGAGTT
GCTCATCAAT TTGTAACAGT TTTTATATTT GGTATGTCTA ATGCAACAGC AGTAATTATA
GGAAATACCA TAGGAGAAGG GAAAAAAGAA AAAGCAAAGG AATATGCTTA TAGCATAGGG
ATTTTCAGTG TTGTTATGGG GTGTATATCA GGACTTATGA TTTTACTTAT AAAACCATTT
GTTGTTAATT TCTATAATGT ATCTTATTCA ACAAAATTAA TAGCTATGGA AATAATGACT
GTAACTTCAG GAATAATAGT ATTTCAATCT CTTGCAAGTA ATTTTATGAT GGGTGTACTT
AGAGGTGGTG GAGATGCTAA GTTTGTCTTG ATAAATGATC TTATTTTTAT GTGGCTTGTT
GCTATTCCAG GTGGGTTTTT TGTAGCCTTT GTTTTAGAAC TTCCAGTTGC CTTAGTATTC
TTAGTTATAA AATGTGATGA AATATTAAAA TCTCTTACTA GTGTATATAG GGTAATTAGT
GGAAAATGGG TAAATGATGT AACTAAGGAT TATGAATTTA AGGAAGTAAA GTGTTAG
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| Protein sequence | MIITRDKRFY RLLFSIALPI AVQNLITFMV SMVDTLMVGA LGEIQLSAVS IANNLFFVLT
ILMFGLAGGS NIMISQYWGK GNVKTIHKIL AIMYRVCLLI TGIFIFIALF LPKYFMGIFT
TDKAVIDFGA SYLRIVCIGY LFYSITNCTI MMLRSVKTVS ISIIVYTASL VVNSILNWIF
IFGNLGAPEL GIRGAAIATV CARITEFSIV LVFMFIYERK IGLKIEHLLK LDKEILKDYV
GLCTPVLCNE LLWAIGASMI SVIVGRMGTE VVAANSINGV AHQFVTVFIF GMSNATAVII
GNTIGEGKKE KAKEYAYSIG IFSVVMGCIS GLMILLIKPF VVNFYNVSYS TKLIAMEIMT
VTSGIIVFQS LASNFMMGVL RGGGDAKFVL INDLIFMWLV AIPGGFFVAF VLELPVALVF
LVIKCDEILK SLTSVYRVIS GKWVNDVTKD YEFKEVKC
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