Gene CPF_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0851 
Symbol 
ID4202238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1009752 
End bp1010813 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content27% 
IMG OID638081734 
Productputative carbohydrate diacid regulator 
Protein accessionYP_695301 
Protein GI110800802 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3835] Sugar diacid utilization regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA GGGAGCTAGC TCAAAATATA GTTAATAAAA TGATGGAGGT TATTCCTTAC 
AATGTAAACA TAATGAATCA TAAGGGAGTA ATAATAGGTA GTGGTGATTC AAGTAGAATA
GGAATGATAC ATAATGGTGC TTTAGAAGCC TTAAGGGTAA AAAAGGTGGT TGAAATATCT
AAGGATGGGG ATAAGGTGAA ATCTGGAGTT AATTCACCTA TATTTTTTAG AGAAAAAGCT
ATAGGGGTTA TTGGTATAAC AGGAAATCCT AAAAATGTTA GGCAATTTAC ACAGCTTGTA
ACTGTTACTG CTGAACTTTT AATAAATCAA GAATACACTT TGAATAAACA TATAGTTAAA
GAAAGATTGA AAGAGGAATT TATTTATGAA TGGCTGTATT CAAAAGAGGC CTATGACTTA
GAATTTATTC AAAGGGGAGC CAATGTAGGT ATTGATATAT CATTAGATAG AATAATACTT
GTATTGGAGT TTCAGAAAGA TCAATTTAAG GAAATAATTA AAAAAATAAA AAGGTTCATA
AAAGAAGATG AGTACTATAT AAATTTAACT TCAAATAGAA TAGTTGTAAT TTTGTTAGAT
AATAATTTGC TCTTTAAGAG GTTAAAAGAA TTAAAGGAAA TTATGAGTGA CACAAATTCT
AAGATAGGAT TAAGCTCAAA ACATAAAATT ATATCAAAAT CTATGAATGA GGCAGTGGAA
GCAGTAGATA TAGGAAGTAA ATTATATAAA AATGAGTTCT TTTATGATTA TAAAAAAGTA
AAGGTTTTTA GTTACTTAGA TAATTTTTTA GATGAAGAGG ATTGGAAAAT TATTAAAAAC
AAGATATTAG AGGAAAATAT GGGAGAAGAA TTATTAGAAA CCTTTATATC TTATATGAAG
CATAGTGGAG AGAGAAAAAA GACCGCAGAA TCCTTACATA TACATAGAAA TACATTGAAT
TATAGACTAG AGAGAATTGA AGAAATAACA GGCTTAAGCT TTGATAATTA TTTAGATTTA
TTTCAATTTT TGATTGCATA TATAGTAAGT CAATTAAAAT AA
 
Protein sequence
MLNRELAQNI VNKMMEVIPY NVNIMNHKGV IIGSGDSSRI GMIHNGALEA LRVKKVVEIS 
KDGDKVKSGV NSPIFFREKA IGVIGITGNP KNVRQFTQLV TVTAELLINQ EYTLNKHIVK
ERLKEEFIYE WLYSKEAYDL EFIQRGANVG IDISLDRIIL VLEFQKDQFK EIIKKIKRFI
KEDEYYINLT SNRIVVILLD NNLLFKRLKE LKEIMSDTNS KIGLSSKHKI ISKSMNEAVE
AVDIGSKLYK NEFFYDYKKV KVFSYLDNFL DEEDWKIIKN KILEENMGEE LLETFISYMK
HSGERKKTAE SLHIHRNTLN YRLERIEEIT GLSFDNYLDL FQFLIAYIVS QLK