Gene CPF_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0838 
Symbol 
ID4203605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp992119 
End bp992829 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content23% 
IMG OID638081722 
ProductFic family protein 
Protein accessionYP_695289 
Protein GI110800923 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0586885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATG AACATTATGA GAAATTTCTA AAAATATTAA AGGAAACTAA GGGAATTCAT 
AATTCATTAA ATGAGATATT AAAATATGAT TTTATTTATA ATTCTAATAA AATAGAAGGA 
AGTACATTTA CAAAAGAAGC TTTACAAATG CTTATGGAAA AAAATATAGT TACAGGAACT 
CATACATTAG ATGATGTACA GGAAACTGTT AATTCATTTT ATACATTTGA TTTAGTTATT 
GATAGTTTAG ATAAACCTTT AACTTTAGAA ATGCTAAAAG AGTGGCATGC TAGTTTAATG 
TATAGAACTA GATTATATGA TTTAGGATTA GCAGGAGTTT TTAAAAAATA TGCTAATAAA 
ATATTAGGAG CTAATTTTGA AACTGCGAAT CCTTGGGAAG TTGAAGATAA ACTTAATGTT 
TTAATAAATA GATTTAATAA TTTAAAAGAA GCAACTTTAG AAGAAATAGC AAAATTTCAT 
TTGGTATTTG AAAGAATACA TCCATTTCAA GATGGTAATG GGAGAATTGG TAGATTTATA 
TTCTTAAAAC AATTGCTTGA TAATAGATTA CCATTTAAAT ATATGAATGG CGAAAGTTCA 
ACTGAATATA AAAAAGCTTT AGGTGAATCT ACAAATGATA ATGTAAGACC ATTAATTGAA 
TATTTGAATA AACAAAAAGA TTTTATTGAA GATAATAGGA ATATGTTTTA A
 
Protein sequence
MNNEHYEKFL KILKETKGIH NSLNEILKYD FIYNSNKIEG STFTKEALQM LMEKNIVTGT 
HTLDDVQETV NSFYTFDLVI DSLDKPLTLE MLKEWHASLM YRTRLYDLGL AGVFKKYANK 
ILGANFETAN PWEVEDKLNV LINRFNNLKE ATLEEIAKFH LVFERIHPFQ DGNGRIGRFI 
FLKQLLDNRL PFKYMNGESS TEYKKALGES TNDNVRPLIE YLNKQKDFIE DNRNMF