Gene CPF_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0820 
Symbol 
ID4201580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp970981 
End bp971892 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content35% 
IMG OID638081704 
ProductPTS system mannose/fructose/sorbose family IID subunit 
Protein accessionYP_695271 
Protein GI110801273 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA ATTTAAAATT AACAAAAAAA GATCGTCTTT CTATTTGGTG GCGTTCAACT 
TTCATTCAAG GATCTTGGAA CTATGAAAGA ATGCAAAATG GTGGTTGGGC ATTCTCATTA 
ATTCCTGCAA TCAAAAAATT ATACAAAACT AAAGAAGAAA GATCAGCGGC ATTAACACGT 
CACTTAGAAT TCTTCAACAC TCACCCATAT GTAGCTTCAC CTATCATTGG TGTAACATTA 
GCATTAGAAG AAGATCGTGC AAATGGAGCT CAAGTAGATG ATGTAACTAT TCAAGGGGTT 
AAAGTTGGTA TGATGGGATC TTTAGCAGGT ATCGGAGACC CTGTATTCTG GTTTACTGTT 
AGACCTATAT TAGGAGCATT AGGTGCTTCA CTTGCTATGG CTGGTAACAT ATTAGGACCA 
ATAATATTCT TCTTAGGTTG GAATATTATC CGTATGGCAT TTACTTGGTA CACACAAGAA 
TTTGGTTATA AAGCTGGTTC TCGTATTACA GAGGACTTAT CAGGAAACTT ATTACAAGAT 
ATTACAAAAG GTGCATCTAT ACTTGGTATG TTTATATTAG GATCACTAGT TAATAGATGG 
GTATCTATTA AATTTGCTCC AGTAGTATCA ACAGTTCAAT TGAGCCCAGG TGCTTATATT 
GATTGGAATA GCCTTCCAGC AGGTGCAGAA GGTATTAAGG AAGCCTTATT ACAACAATCA 
GCTGGATTAT CTTTAACTGC TGAGAAAGTT ACAACATTAC AAGGAAACTT AGATTCATTA 
ATTCCTGGAC TTGCAGGATT ATTATTAACA TTCCTTTGTA TGTGGTTACT TAAGAAGAAA 
GTATCTCCAA TTGTAATTAT TCTTGCTTTA TTCGCAATCG GTATTGTTTT CCACGTAATA 
GGATTAATGT AA
 
Protein sequence
MEKNLKLTKK DRLSIWWRST FIQGSWNYER MQNGGWAFSL IPAIKKLYKT KEERSAALTR 
HLEFFNTHPY VASPIIGVTL ALEEDRANGA QVDDVTIQGV KVGMMGSLAG IGDPVFWFTV 
RPILGALGAS LAMAGNILGP IIFFLGWNII RMAFTWYTQE FGYKAGSRIT EDLSGNLLQD 
ITKGASILGM FILGSLVNRW VSIKFAPVVS TVQLSPGAYI DWNSLPAGAE GIKEALLQQS 
AGLSLTAEKV TTLQGNLDSL IPGLAGLLLT FLCMWLLKKK VSPIVIILAL FAIGIVFHVI 
GLM