Gene CPF_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0789 
Symbol 
ID4202059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp939036 
End bp939461 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content29% 
IMG OID638081673 
ProductMarR family transcriptional regulator 
Protein accessionYP_695240 
Protein GI110799506 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.232655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAG AAAATTTTTG CCAGTGCTTG TTTTTTACTG TAACCAGATT GAAAAAAATA 
GCAGCTAAAA TAGCTGAAGA TGAATTAAAA CCATTAGGAA TGTCTCCAAC ATATGTATAT
ATACTTCTTG GGGTGAAATT TAAACCAGGA ATAACTCAAA AAGAATTATG TGAAGAACTT
CATTTGAAGC CCTCTACAAT AACTAGACTT ATAGATAAAC TAGTTATAAA TGGATTGGTG
GAAAGAAGAT CAGAGGGAAA ATTATCTCAT ATATATCTAA CTGAGAGTGG GGAAAAGATA
CAAGAGGATA TTAAAAAATA CAGATTAAAG TTACATAATC GTTATAAAGA GATACTTGGA
GAAGAGGAAT ATAATTTTTT AACTAAACTA ACAAATGATT CTGCAAGAAT ATTAGAGTCT
GAATAA
 
Protein sequence
MLEENFCQCL FFTVTRLKKI AAKIAEDELK PLGMSPTYVY ILLGVKFKPG ITQKELCEEL 
HLKPSTITRL IDKLVINGLV ERRSEGKLSH IYLTESGEKI QEDIKKYRLK LHNRYKEILG
EEEYNFLTKL TNDSARILES E