Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0789 |
Symbol | |
ID | 4202059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 939036 |
End bp | 939461 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081673 |
Product | MarR family transcriptional regulator |
Protein accession | YP_695240 |
Protein GI | 110799506 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.232655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTGAAG AAAATTTTTG CCAGTGCTTG TTTTTTACTG TAACCAGATT GAAAAAAATA GCAGCTAAAA TAGCTGAAGA TGAATTAAAA CCATTAGGAA TGTCTCCAAC ATATGTATAT ATACTTCTTG GGGTGAAATT TAAACCAGGA ATAACTCAAA AAGAATTATG TGAAGAACTT CATTTGAAGC CCTCTACAAT AACTAGACTT ATAGATAAAC TAGTTATAAA TGGATTGGTG GAAAGAAGAT CAGAGGGAAA ATTATCTCAT ATATATCTAA CTGAGAGTGG GGAAAAGATA CAAGAGGATA TTAAAAAATA CAGATTAAAG TTACATAATC GTTATAAAGA GATACTTGGA GAAGAGGAAT ATAATTTTTT AACTAAACTA ACAAATGATT CTGCAAGAAT ATTAGAGTCT GAATAA
|
Protein sequence | MLEENFCQCL FFTVTRLKKI AAKIAEDELK PLGMSPTYVY ILLGVKFKPG ITQKELCEEL HLKPSTITRL IDKLVINGLV ERRSEGKLSH IYLTESGEKI QEDIKKYRLK LHNRYKEILG EEEYNFLTKL TNDSARILES E
|
| |