Gene CPF_0784 details

Gene Information

• Locus tag: CPF_0784
• Symbol: ahpC
• ID: 4201800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 933542
• End bp: 934105
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 638081668
• Product: alkyl hydroperoxide reductase, C subunit
• Protein accession: YP_695235
• Protein GI: 110799231
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAA TAAACAAAAA AGTTTCAGAT TTTAAAGTGC AAGCATATCA AAATGGAGAA 
TTTAAAGAAG TTACATCAGA GGATTTAAAA GGACACTGGT CAGTATTCGT ATTCTATCCA 
GCAGATTTTA CTTTTGTTTG TCCAACTGAG TTAGGGGAGT TAGCAGACAA TTATGAAAGC 
TTTAAAGAAA TAGGATGTGA AGTTTACTCA ATATCAACAG ATACTCACTT TGTTCACAAA 
GCATGGGCAG ATGCTTCAGA TACTATAGGA AAGATTAAAT ATCCAATGTT AGCAGATCCA 
ACAGGAAAAT TAGCAAGAGA TTTTGAAGTT ATGATAGAAG AAGAAGGATT AGCATTAAGA 
GGATCTTTCG TAATTAACCC AGAAGGAGAG ATAAAAGCAT ATGAAATCCA TGATAACGGA 
ATTGGAAGAA ATGCTGAAGA ATTATTAAGA AAGGTTCAAG CAGCTCAGTT TGTTGCAGAA 
CATGGAGATC AAGTTTGTCC AGCTAAATGG AAACCAGGTG AAGAAACATT AGCACCAAGT 
TTAGATTTAA TAGGAAAACT TTAA 

 

Protein sequence

MSLINKKVSD FKVQAYQNGE FKEVTSEDLK GHWSVFVFYP ADFTFVCPTE LGELADNYES 
FKEIGCEVYS ISTDTHFVHK AWADASDTIG KIKYPMLADP TGKLARDFEV MIEEEGLALR 
GSFVINPEGE IKAYEIHDNG IGRNAEELLR KVQAAQFVAE HGDQVCPAKW KPGEETLAPS 
LDLIGKL