Gene CPF_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0776 
Symbol 
ID4201147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp926776 
End bp927588 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content27% 
IMG OID638081660 
Producthypothetical protein 
Protein accessionYP_695227 
Protein GI110798869 
COG category[S] Function unknown 
COG ID[COG2461] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000379179 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AAAAAGTAAT ATTAAAAAAT GGACAAGCAA AGGTTATTGA TTCTGAAAGA 
ATCAAAATGT TAACTGACTT TTTAAGAAGA ATAAATAAAG AAGGTATAAC TAAAGAATTA
AGAGAAGAAG GATTAGATAT TGTAAAGTCA ATTGATCCGT TAGAATTATC AATTGCAGAA
CAAAATTTAA TAGATGATGG TATGGAGCCT AGTGAATTAA GACATTTATG TGATATACAT
ATGGAGATTC TTAAGGATGA ACTTGAAAAA TTAAAAAGCA ATATATCAAG GGGGCATGTC
TTAGATACTT TAGTTGAAGA GCATACAAAG ATATTAGCAT TATTAGAAGA TCTTGAAGCA
GTTACTAATG AGATAGTAAA AATGGATAAG TATAATAAGG AAAAGGAAGA ATTTTCAAAG
GCTTTAGAAA TAGTACAAGG TATTTTAGAT GCAGAACTTC ATCATAAGAG AGAAGAAGAT
GTATTATTTC CAGAGTTAGA AAAGAGAGAG ATTACTGGTC CAACAAGAAT AATGAGATTA
GAACATGATC AATTAAGAGA AAAAAAGAGA AGATTAAAGG AATTAATAAA AGTAGTTGAA
TATCTTGATT TTGAAGACTT TAAAGATAAT CTTCAATCTT TATCTAAAGA AATTTGTTTT
GAACTTAAGG ATCATATATT TAAAGAAAAT TATATTTTAT ATCCAACAGC TTTAGAGGCT
ATAAAAGATG AAAAACTTTG GGAGAATATG AGAGAAAAAT GTGATGACAT AGGATATTGT
CCATTTACTC CAAAAGAATG TATAGAAAAA TAG
 
Protein sequence
MENKKVILKN GQAKVIDSER IKMLTDFLRR INKEGITKEL REEGLDIVKS IDPLELSIAE 
QNLIDDGMEP SELRHLCDIH MEILKDELEK LKSNISRGHV LDTLVEEHTK ILALLEDLEA
VTNEIVKMDK YNKEKEEFSK ALEIVQGILD AELHHKREED VLFPELEKRE ITGPTRIMRL
EHDQLREKKR RLKELIKVVE YLDFEDFKDN LQSLSKEICF ELKDHIFKEN YILYPTALEA
IKDEKLWENM REKCDDIGYC PFTPKECIEK