Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0765 |
Symbol | |
ID | 4202620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 907386 |
End bp | 908225 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081649 |
Product | AraC family transcriptional regulator |
Protein accession | YP_695216 |
Protein GI | 110799290 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.448457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATAT TGTGGAAAAA GTATGTTAAA GAAAACTTTG AAATGAATGT AGATGAATGT GGTATAGAAC AAGGTATACC AGGATTAGGA TATAACTATG AAGTATTGAA AAATGCCGTT ATTCATTACG TAACTAAGGG ATATGGGACT TTTAAATTTA ATGGTAAGGT ATTTAACTTA AAACAAGGTG ATATCTTTAT ACTACTAAAA GGTATGCAAG TTGAGTATGT GGCTTCTATT GATGATCCTT GGGAATACTA CTGGATAGGC TTTAGTGGTT CAAATGCTAA TGAATATTTA AATAGAACTT CTATTACTAA CTCTTGTGTT GCTAATTGTG AAGAAAACTC AAAAATTCCA CAAATAATAT TAAATATGTG CGAAATATCA AAAACTTATA ATCCTTCAAG ATCTGATGAC ATACTATTAC TAAAGGAACT TTACTCATTA TTGTACGCAC TTATAGAAGA ATTCCCAAAA CCCTTTGAAT ACAAAGATAA GGAATTACAC ACATATATTC AAGATGCCCT TAATTTCATT AATTCTAATT ATATGCATAG CATAACCGTT CAAGAAATTG CTGATTATGT AAACTTAAGC AGAAGTTATT TATATAAAAT GTTCATAAAA AATCTTGGAA TTTCTCCTCA AAGATATTTA ATAAATCTTA GAATGTACAA AGCCACTCTT TTACTAAAAG GCACTAAACT TCCCATAGGT GAAGTTGCAA GTAGTGTAGG CTATAGTGAT TCACTATTAT TTTCAAAAAC TTTTTCAAAA CATTTTTCAA TGTCTCCACT AAATTACAGA AATAATCAAG TAAATAAAAC AAGTATATAA
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Protein sequence | MQILWKKYVK ENFEMNVDEC GIEQGIPGLG YNYEVLKNAV IHYVTKGYGT FKFNGKVFNL KQGDIFILLK GMQVEYVASI DDPWEYYWIG FSGSNANEYL NRTSITNSCV ANCEENSKIP QIILNMCEIS KTYNPSRSDD ILLLKELYSL LYALIEEFPK PFEYKDKELH TYIQDALNFI NSNYMHSITV QEIADYVNLS RSYLYKMFIK NLGISPQRYL INLRMYKATL LLKGTKLPIG EVASSVGYSD SLLFSKTFSK HFSMSPLNYR NNQVNKTSI
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