Gene CPF_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0731 
Symbol 
ID4202168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp869254 
End bp870372 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content26% 
IMG OID638081616 
ProductROK family protein 
Protein accessionYP_695183 
Protein GI110798937 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TAAAAAATAG TGAAATTAAG GTTTCAAATA AAGCTAAAAT AGCGAATTTT 
ATTTATAAAA AAAATGAAAC ATCAAAGCAA GAAATAGTTA AGGAATTAGG AATTAGTAAT 
CCAACTGTAC TTCAAAATGT AAAGGAATTA ATCGAAGAAG GAATTGTGGA GGAAGTTGGG 
AAATATCAAT CAACAGGTGG AAGAAAAGCG AAAGTATTAG CTATTGTTAG GGATAAGAAC 
TATTCTATTG GAGTTGATAT TACTAAAAAT CATATTAATA TTGTTTTACT GGATATGAAA 
GCTATTATGA TAAATAGTAA TAGAATAAGG ATTAAATATA GCGATTCAAT TGAATATTAT 
AAATCAATTG GAGGTTATAT AGATAAATTT ATTTTTGATA ATAATATCGA AGAAGATAAA 
ATATTAGGGG TAGGAATATC TATACCAGGT ATTATAGATG AAAAAAATCT GCTTTTAGTA 
AGATCTCATA TTTTAGAGGT TAAAAACATA AGCTTGAAAA ATTTCGAAAA GTTTATTAAT 
TACAATATAT GTTTTGATAA TGATGCCAAT AGTGCTGCGT ATGCAGAAAT TTCATCTTAT 
AAGAAGGATG CAGTTTATTT ATCTATTAAT GATACTGTTG GAGGAGCTAT TTATATAGAT 
AGAAGTATAT ATATGGGAGA AACTTTCAAA AGTGCAGAAT TTGGACATAT GATAATAGAA 
AAAGGTGGGA GAACATGCTA TTGTGGTAAA AATGGCTGTG TTGATGCATA CTGTTCTGCA 
AAAGTTTTAA GTAAATACTC AGATGATGAT TTAGAGTTGT TTTTTGAAAT GACGAGAAAT 
GGTGACAAAA AATATTTAGA AATATTGGAA AAGTATCTTG AATATCTTTC AATTACAATT 
ACTAATTTAA GAATGATTTT TGATTGTGAT ATTGTTATAG GTGGCTATAT TGGTGGCTTT 
TTAGATGAAT ATAGATTACA ATTAGACAAA AGTATTACTA AATATAATAA TTTTGATATG 
GATACATCTT ATATTTATAC TGGAAAATAT AAAAAAGAAG CGTCTGCAAT AGGGATAGCA 
ATGAAATTTA TTGATAGATT TTTTTATGAA TTAATATAG
 
Protein sequence
MKNLKNSEIK VSNKAKIANF IYKKNETSKQ EIVKELGISN PTVLQNVKEL IEEGIVEEVG 
KYQSTGGRKA KVLAIVRDKN YSIGVDITKN HINIVLLDMK AIMINSNRIR IKYSDSIEYY 
KSIGGYIDKF IFDNNIEEDK ILGVGISIPG IIDEKNLLLV RSHILEVKNI SLKNFEKFIN 
YNICFDNDAN SAAYAEISSY KKDAVYLSIN DTVGGAIYID RSIYMGETFK SAEFGHMIIE 
KGGRTCYCGK NGCVDAYCSA KVLSKYSDDD LELFFEMTRN GDKKYLEILE KYLEYLSITI 
TNLRMIFDCD IVIGGYIGGF LDEYRLQLDK SITKYNNFDM DTSYIYTGKY KKEASAIGIA 
MKFIDRFFYE LI