Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0721 |
Symbol | |
ID | 4202671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 856777 |
End bp | 858861 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081606 |
Product | putative exo-alpha-sialidase |
Protein accession | YP_695173 |
Protein GI | 110799574 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTACA AAGGGATAAC TTTAATTTTA ACAGCTGCTA TGGTTATAAG TGGTGGTAAT TATGTATTGG TTAAAGGAAG TACTTTAGAC TCAGGGAAAA ATAATAGTGG GTATGAGATT AAAGTAAATA ATAGTGAAAA TTTAAGTTCA CTAGGAGAAT ATAAGGATAT AAATTTAGAA AGTTCAAATG CTTCTAATAT TACTTATGAT TTAGAAAAAT ATAAAAATTT AGATGAAGGT ACTATTGTTG TAAGATTTAA TTCCAAGGAC TCTAAAATAC AAAGCTTATT AGGAATAAGT AATAGCAAGA CTAAAAATGG ATATTTTAAT TTTTATGTTA CTAATTCAAG AGTTGGTTTT GAGCTTAGAA ATCAAAAAAA TGAGGGGAAT ACACAAAATG GAACTGAGAA TCTAGTACAT ATGTATAAAG ATGTTGCTTT AAATGATGGG GATAATACTG TTGCCTTAAA GATTGAAAAA AATAAAGGTT ATAAGCTTTT CCTTAATGGA AAAATGATAA AAGAAGTTAA AGATACAAAT ACAAAGTTTT TAAATAATAT AGAAAATTTA GATAGTGCTT TTATTGGAAA AACTAATAGA TATGGACAAT CTAATGAATA TAATTTTAAG GGCAATATAG GTTTTATGAA TATATATAAT GAACCTTTAG GCGATGATTA TTTACTTAGT AAGACTGGAG AGACAAAAGC TAAAGAAGAA GTTCTTGTAG AGGGAGCTGT AAAGACAGAG CCAGTTGATT TATTTCATCC AGGATTTTTA AATTCTAGTA ATTACAGAAT ACCGGCCTTA TTTAAAACAA AAGAAGGAAC TTTAATAGCT TCAATAGATG CAAGAAGACA AGGGGGAGCT GATGCGCCTA ATAATGACAT AGATACAGCA GTTAGAAGAA GTGAAGATGG AGGGAAAACT TGGGATGAAG GACAAATAAT AATGGACTAT CCTGATAAAT CCTCTGTTAT AGATACAACT TTAATTCAAG ATGATGAAAC AGGAAGAATA TTCTTGTTAG TAACTCATTT CCCTTCAAAA TATGGCTTTT GGAATGCTGG ATTAGGAAGT GGATTTAAAA ATATTGATGG AAAAGAATAT TTATGTCTTT ACGATTCATC AGGTAAAGAA TTTACTGTAA GAGAAAATGT AGTATATGAC AAAGATGGCA ATAAAACAGA ATATACAACA AATGCTTTAG GAGATTTATT TAGAAATGGA ACCAAGATAG ATAATATAAA TTCTAGTACA GCACCTTTAA AAGCAAAAGG GACAAGCTAT ATAAATCTTG TATATAGTGA TGATGATGGA AAGACTTGGA GTGAGCCACA AAATATTAAT TTCCAAGTTA AAAAGGATTG GATGAAGTTT TTAGGAATAG CTCCAGGTAG GGGAATACAA ATAAAAAATG GAGAACATAA AGGAAGAATA GTAGTTCCTG TTTACTATAC AAATGAAAAA GGTAAACAAT CTAGTGCTGT AATATATAGT GATGATAGTG GTAAGAATTG GACAATAGGA GAATCTCCAA ATGATAATAG AAAATTAGAA AATGGAAAGA TAATAAATTC TAAAACCTTA TCAGATGATG CACCTCAATT AACTGAATGT CAAGTAGTAG AAATGCCAAA TGGTCAATTA AAATTATTTA TGAGAAATTT AAGTGGATAT TTAAATATTG CTACAAGTTT TGATGGGGGA GCTACTTGGG ATGAGACAGT AGAGAAAGAT ACTAATGTTT TAGAGCCATA TTGCCAACTA AGTGTTATAA ATTATAGTCA AAAGATAGAT GGAAAGGATG CTGTTATTTT CTCAAATCCA AATGCAAGAA GTAGATCAAA TGGTACTGTG AGAATTGGAT TGATTAATCA AGTTGGAACA TACGAAAATG GTGAACCTAA ATATGAATTT GATTGGAAAT ATAATAAATT AGTTAAACCA GGTTATTATG CTTATTCTTG CTTAACAGAA TTAAGCAATG GAAATATTGG ATTATTATAT GAGGGTACAC CAAGTGAAGA AATGTCTTAT ATTGAAATGA ATTTAAAATA TTTAGAGAGT GGAGCTAATA AATAA
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Protein sequence | MNYKGITLIL TAAMVISGGN YVLVKGSTLD SGKNNSGYEI KVNNSENLSS LGEYKDINLE SSNASNITYD LEKYKNLDEG TIVVRFNSKD SKIQSLLGIS NSKTKNGYFN FYVTNSRVGF ELRNQKNEGN TQNGTENLVH MYKDVALNDG DNTVALKIEK NKGYKLFLNG KMIKEVKDTN TKFLNNIENL DSAFIGKTNR YGQSNEYNFK GNIGFMNIYN EPLGDDYLLS KTGETKAKEE VLVEGAVKTE PVDLFHPGFL NSSNYRIPAL FKTKEGTLIA SIDARRQGGA DAPNNDIDTA VRRSEDGGKT WDEGQIIMDY PDKSSVIDTT LIQDDETGRI FLLVTHFPSK YGFWNAGLGS GFKNIDGKEY LCLYDSSGKE FTVRENVVYD KDGNKTEYTT NALGDLFRNG TKIDNINSST APLKAKGTSY INLVYSDDDG KTWSEPQNIN FQVKKDWMKF LGIAPGRGIQ IKNGEHKGRI VVPVYYTNEK GKQSSAVIYS DDSGKNWTIG ESPNDNRKLE NGKIINSKTL SDDAPQLTEC QVVEMPNGQL KLFMRNLSGY LNIATSFDGG ATWDETVEKD TNVLEPYCQL SVINYSQKID GKDAVIFSNP NARSRSNGTV RIGLINQVGT YENGEPKYEF DWKYNKLVKP GYYAYSCLTE LSNGNIGLLY EGTPSEEMSY IEMNLKYLES GANK
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