Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0705 |
Symbol | |
ID | 4202530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 838665 |
End bp | 839654 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081590 |
Product | choloylglycine hydrolase |
Protein accession | YP_695157 |
Protein GI | 110800687 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3049] Penicillin V acylase and related amidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.984776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTACAG GATTAGCCTT AGAAACAAAA GATGGATTGC ATTTATTTGG AAGAAATATG GATATTGAAT ATTCATTTAA TCAATCTATT ATATTTATTC CTAGAAACTT TAAATGTGTA AACAAATCAA ACAAAAAAGA ATTAACAACA AAATATGCTG TTCTTGGAAT GGGAACTATT TTTGATGATT ATCCTACCTT TGCAGATGGT ATGAATGAAA AGGGATTAGG ATGTGCTGGC TTAAATTTCC CTGTTTATGT TAGCTATTCT AAAGAAGATA TAGAAGGTAA AACTAATATT CCAGTATATA ATTTCTTATT ATGGGTTTTA GCTAATTTTA GCTCGGTAGA AGAGGTAAAG GAAGCATTAA AAAATGCTAA TATAGTGGAT ATACCTATTA GCGAAAATAT TCCTAATACA ACTCTTCATT GGATGATAAG CGATATAACA GGAAAGTCTA TTGTAGTTGA ACAAACAAAG GAAAAATTAA ATGTCTTTGA TAATAATATT GGAGTATTAA CTAATTCACC TACTTTTGAT TGGCATGTAG CAAATTTAAA TCAATATGTA GGTTTGAGAT ATAATCAAGT TCCAGAATTT AAGTTAGGAG ATCAATCTTT AACTGCTCTA GGTCAAGGAA CTGGTTTAGT AGGATTACCA GGGGACTTTA CACCTGCATC TAGATTTATA AGAGTAGCAT TTTTAAGAGA TGCAATGATA AAAAATGATA AAGATTCAAT AGACTTAATT GAATTTTTCC ATATATTAAA TAATGTTGCT ATGGTAAGAG GATCAACTAG AACTGTAGAA GAAAAAAGTG ATCTTACTCA ATATACAAGT TGCATGTGCT TAGAAAAAGG AATTTATTAT TATAATACCT ATGAAAATAA TCAAATTAAT GCAATAGACA TGAATAAAGA AAACTTAGAT GGAAATGAAA TTAAAACATA TAAATACAAC AAAACTTTAA GTATTAATCA TGTAAATTAG
|
Protein sequence | MCTGLALETK DGLHLFGRNM DIEYSFNQSI IFIPRNFKCV NKSNKKELTT KYAVLGMGTI FDDYPTFADG MNEKGLGCAG LNFPVYVSYS KEDIEGKTNI PVYNFLLWVL ANFSSVEEVK EALKNANIVD IPISENIPNT TLHWMISDIT GKSIVVEQTK EKLNVFDNNI GVLTNSPTFD WHVANLNQYV GLRYNQVPEF KLGDQSLTAL GQGTGLVGLP GDFTPASRFI RVAFLRDAMI KNDKDSIDLI EFFHILNNVA MVRGSTRTVE EKSDLTQYTS CMCLEKGIYY YNTYENNQIN AIDMNKENLD GNEIKTYKYN KTLSINHVN
|
| |