Gene CPF_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0704 
Symbol 
ID4202260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp837339 
End bp838550 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content28% 
IMG OID638081589 
Producthypothetical protein 
Protein accessionYP_695156 
Protein GI110800630 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTTGGAGTAT TTTTACTTTT ACCTATAAAG AGACTATTAG AAATAAAGCT 
CTTATAATAT CAACAATAAT TACTTTAATT GTAATGCTAG GATTCTTTAA TATGGATAAA
ATAGTAGGGC TCTTTAATAG GGAAGGCTCT AAAGATTTAA TAATGGTAAG CACAGAAGCT
AATAATAAAT TTTTTGACTC TAATACTTTA GAAAGTTTAA ATGATGATGA TTTTAAAGTT
GTTTTAAGCA AAGATTCAGA AGAAACTAAT AAGGTTAAAA AGGAAATAGA AAATGGAAAG
TCAGATTATA AAGCTTTGCT TGAAGTTTCA ACAGGTAAAG AGGTGTCAGG AAAATTATAT
GTTAATGAAC TACCTGGAGA TTCTTTAATG AAGAAAGTAA ATACAATTTT AAATGACACT
AAATTTGTAT TTTCAATGGA GAAGTTTAAT ATAACACCAG AAGAGTATGC TAATATAATG
ACTCCAGCTC AGCTTGATGT GGTTCAAACA GGAAATGCTT CACATGAAAG AATGGCTTTA
GTTTATGCTC TTGTTTTTGG AATTTATATA ATAACTCTTA CTTTTGGTTC TATGGTTGCT
AATTCAGTTA TAGAAGAAAA GAGTAATAGA ATAATGGAAA CCTTAATAAC TATGGCTAAA
CCAATGGAAC TTTTCTTTGG TAAGGTATTA GGAATTTGTG CTGTAGGGCT TACACAGATA
GCAGTAATCC TAGGCTCTGG CTTAATAATG CTTAAAACTT CAGGTACAAG TTTAGAAGTT
TTAAGTTCAT TAAATTTAAA TGCTAGTATA ATATTTGCGT TTGTTGCCTA TTTCCTTTTA
GGATATTTAA CATTCTCAAT GCTTTATGCA GCAGTGGCTT CCTTAGCTAC AAGTTCTCAA
GATGTCAATT CATCAATGGG AGCAATTACC TTAGTCTTTG TTGGAGTCTT CTTACTTGCA
ATGAACTGTA TGTTTAATAT TGAATCAACC TTAGCTAAAG TATTTAGTTA TATACCATTT
GCTTCTCCTT TAATAATGTT TGAGAGAATA GTTTTATCAA AAGTTACTTT TATGGAAATT
TTAATAACTA CTATTATTAA TGTTGGATTC ATAATTTTAG TTGGATTCTT TAGTAGTAAA
TTATATAAAA AAGGAACTTT ACATTATGGT AAAAAGGCTT CATTAATAAA AATTATAAGA
GGTAAAGAAT AA
 
Protein sequence
MKKFWSIFTF TYKETIRNKA LIISTIITLI VMLGFFNMDK IVGLFNREGS KDLIMVSTEA 
NNKFFDSNTL ESLNDDDFKV VLSKDSEETN KVKKEIENGK SDYKALLEVS TGKEVSGKLY
VNELPGDSLM KKVNTILNDT KFVFSMEKFN ITPEEYANIM TPAQLDVVQT GNASHERMAL
VYALVFGIYI ITLTFGSMVA NSVIEEKSNR IMETLITMAK PMELFFGKVL GICAVGLTQI
AVILGSGLIM LKTSGTSLEV LSSLNLNASI IFAFVAYFLL GYLTFSMLYA AVASLATSSQ
DVNSSMGAIT LVFVGVFLLA MNCMFNIEST LAKVFSYIPF ASPLIMFERI VLSKVTFMEI
LITTIINVGF IILVGFFSSK LYKKGTLHYG KKASLIKIIR GKE