| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0648 |
|---|
| Symbol | araD |
|---|
| ID | 4203710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 778217 |
|---|
| End bp | 778915 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638081533 |
|---|
| Product | L-ribulose-5-phosphate 4-epimerase |
|---|
| Protein accession | YP_695101 |
|---|
| Protein GI | 110800042 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGA ACTTAAAAAA AGAAGTTTAC GAAGCTAATA TGCTTCTTCC AAAATATAAT
TTAGTAACTT TTACATGGGG GAATGTTTCT GCCATAGATA GAGAAAAAGG ACTTGTTGTA
ATTAAACCAT CAGGAGTTGA GTATGACACA ATGAAACCAG AAGATATGGT TGTGGTTGAT
TTAGAGGGAA ATATTGTTGA AGGGAAATAT AAACCTTCAT CAGATACAGA TACTCACTTG
AAACTTTACA AGGAGTTTAA GAATATAGGA GGAATAGTTC ATACACATTC TAGATGGGCA
ACAATATTTG CTCAAGCAGG AAGAGGAATA AAGCCATATG GAACAACTCA GGCAGATTAT
TTTGCAGATG AAATCCCTTG TACAAGAGAT ATGACTAGAG AAGAGATTGA AGGAAATTAT
GAATATAATA CAGGGGTTGT AATTGTTGAA AGATTCAAAG ACATGAATCC AGAGAATATT
CCAGCAGTAC TTGTTAAAAA TCATGGTCCA TTTACTTGGG GAAAGGATGC TAAAGATGCT
GTTCATAATG CTGTTGTTCT AGAAGAAGTG GCAATGATGG CATATAACAC AGAAATATTA
GCAAATAAAA ATGTAGATAG TATGTCTGAT GACTTATTAA ATAAACACTT TTCAAGAAAG
CATGGTCCAA ATGCTTACTA TGGACAAACA GGAGCTTAA
|
|---|
| Protein sequence | MLENLKKEVY EANMLLPKYN LVTFTWGNVS AIDREKGLVV IKPSGVEYDT MKPEDMVVVD
LEGNIVEGKY KPSSDTDTHL KLYKEFKNIG GIVHTHSRWA TIFAQAGRGI KPYGTTQADY
FADEIPCTRD MTREEIEGNY EYNTGVVIVE RFKDMNPENI PAVLVKNHGP FTWGKDAKDA
VHNAVVLEEV AMMAYNTEIL ANKNVDSMSD DLLNKHFSRK HGPNAYYGQT GA
|
|---|
| |