Gene CPF_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0644 
Symbol 
ID4203008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp774462 
End bp774896 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content31% 
IMG OID638081529 
Productputative PTS system, ascorbate-specific IIA component SgaA 
Protein accessionYP_695097 
Protein GI110801412 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAG AATTAATAGA AAAAGGTAGA TATTCTTTTC ATGGTGGCTT TGATAATTGG 
GAGGATGCAG TTAAGGCTGC ATGTGCTCCC TTAGAAAAAG AAAAAGTTAT CGAAAAAGAG
TATGCGGATT TAATAATAAA TAGTATTAAA AAACATGGAC CATATATAGT AATTGCGCCA
AAGATTGCTA TACCACATGC ACAAGAAGGA CATGGAGTTA ATGAAACAGC TATATGCTTT
ATGAAAACGA ATACTCCAGT GAGCTTTGGT GAAGGGGAAG AGTATGATGC TCAATTATTC
TTTGTTTTAG CTTCAGTAGA TAATGAAGTA CATTTAAAGA ATTTAACTAA AATGGTTGAG
TTAATTTCAG ATGAAGAAAT TGTAGAAAAG CTTTTAGAAG CTCAATCAGT TGAGGATCTT
AAAAAATTAG TATAA
 
Protein sequence
MLKELIEKGR YSFHGGFDNW EDAVKAACAP LEKEKVIEKE YADLIINSIK KHGPYIVIAP 
KIAIPHAQEG HGVNETAICF MKTNTPVSFG EGEEYDAQLF FVLASVDNEV HLKNLTKMVE
LISDEEIVEK LLEAQSVEDL KKLV