| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0626 |
|---|
| Symbol | glnS |
|---|
| ID | 4201743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 752961 |
|---|
| End bp | 754619 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638081511 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_695079 |
|---|
| Protein GI | 110801069 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00799923 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATG CTGAGCACTC ATCAAACTTT ATAAGAAATA TAATAATAGA TGATTTAGAT
AGCAAAAAAC ATGATACAAT AATAACTCGT TTTCCACCTG AACCTAATGG ATATTTACAT
ATAGGTCATG CAAAGTCTAT AGTTTTAAAC TTTGAATTAG GAAAAGAGTT TAACGGAAGA
ACTAACCTAA GATTTGATGA TACAAATCCA ACTAAAGAGG ATACGGAATA CGTTGAATCT
ATTAAAGAAG ATGTTCATTG GTTAGGTTAT AACTGGAGCG AATTACATTT TGCATCAAAC
TACTTTGATG AAATGTATAA AAGAGCTCTA CTTTTAATTA AAAAAGGTAA AGCTTATGTT
TGTGATTTAA CTCCAGAAGA AATCAAAGAA TATAGAGGTA CTCTTACTGA GCCTGGTAAG
GAAAGTCCAT ATAGAAATAG ATCAGTTGAA GAAAACTTAG ATTTATTTGA AAGAATGAGA
AAAGGTGAAT TTGAGGACGG TTCAAAAGTT TTAAGAGCTA AAATAGATAT GAGCTCACCT
AACATAAACT TTAGAGATCC TATAATTTAT AGAATTGCTC ATGCTAGTCA CCATAATACA
GGTGATAAAT GGTGTATCTA CCCTATGTAT GACTTTGCTC ATCCATTAGA AGATGCTATT
GAAGGAATAA CTCACTCTAT TTGTACTTTA GAATTTGCTG ATCACAGACC ATTATATGAT
TGGTTCGTTA AAGAATGTGA AATGGAAAGT GTTCCAAGAC AAATTGAGTT TGCAAGACTT
AATATCACAA ACACTGTTAT GAGTAAAAGA AAATTAAAGC AATTAGTTGA TGAAGGCATA
GTTGATGGTT GGGATGACCC AAGAATGCCT ACTGTTGCTG GACTTAGAAG AAGAGGTTAC
ACTCCTAAGT CAATAAGAAA CTTCTGTAAA GCTATAGGAG TTGCTAAGGC AGATTCTACT
GTTGATTCTC AAATGCTTGA GCATTTCATA AGAGAAGATC TTCAAGAAAC TGCTCCAAGA
GCTATGGCTG TTATAAATCC ACTTAAATTA GTTATAACAA ACTATCCTGA GGGAGAATCA
GAAATTCTTG AAATAGAAAA TAATCCAAAG GATGAATCAG CTGGTAAAAG AGCTGTTACA
TTCTCAAGAG AAGTTTATAT TGAAAGAGAA GATTTCATGG AAAATCCTCC AAAGAAATAT
TTCAGATTAT TCCCAGGAAA CGAAGTAAGA TTAAAAGGTG CTTATTTTGT AAAATGTAAC
GAAGTAATAA AAGATGAAAA TGGTGAAGTT ACAGAAATTC ACTGTACTTA TGACCCAGAA
ACTAAGAGTG GAACTGGATT TACTGGAAGA AAAGTTAAAG GAACAATCCA CTGGGTTGAT
GCTAATAACT GTATTCCTGC TGAATTTAGA TTATATGAAC CATTAATCTT AGATGATTGT
GAAGAAAATG AAGGAAAGCA CTTCCTTGAG CAAATAAATC CTAACTCATT AACTATATGT
AAGGGATTCA TTGAGCCAAG TGCTAAAGAT GCTAAACCTC AAGATAAATA TCAATTATTT
AGACATGGAT ACTTCAATGT TGATCCTAAT TTCACAAGTG ATGATAATTT AGTATTCAAC
AGAATAGTTT CATTAAAGAG TTCATTTAAA TTAAAATAA
|
|---|
| Protein sequence | MSNAEHSSNF IRNIIIDDLD SKKHDTIITR FPPEPNGYLH IGHAKSIVLN FELGKEFNGR
TNLRFDDTNP TKEDTEYVES IKEDVHWLGY NWSELHFASN YFDEMYKRAL LLIKKGKAYV
CDLTPEEIKE YRGTLTEPGK ESPYRNRSVE ENLDLFERMR KGEFEDGSKV LRAKIDMSSP
NINFRDPIIY RIAHASHHNT GDKWCIYPMY DFAHPLEDAI EGITHSICTL EFADHRPLYD
WFVKECEMES VPRQIEFARL NITNTVMSKR KLKQLVDEGI VDGWDDPRMP TVAGLRRRGY
TPKSIRNFCK AIGVAKADST VDSQMLEHFI REDLQETAPR AMAVINPLKL VITNYPEGES
EILEIENNPK DESAGKRAVT FSREVYIERE DFMENPPKKY FRLFPGNEVR LKGAYFVKCN
EVIKDENGEV TEIHCTYDPE TKSGTGFTGR KVKGTIHWVD ANNCIPAEFR LYEPLILDDC
EENEGKHFLE QINPNSLTIC KGFIEPSAKD AKPQDKYQLF RHGYFNVDPN FTSDDNLVFN
RIVSLKSSFK LK
|
|---|
| |