| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0608 |
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| Symbol | |
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| ID | 4202488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 733418 |
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| End bp | 735286 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638081493 |
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| Product | MarR family transcriptional regulator |
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| Protein accession | YP_695061 |
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| Protein GI | 110798829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis
[COG4750] CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATCAT ATGATATTGA AGTTTTAAAG ATTATAAATG ATGAATACAA TATAAGTCAA
AGAAGATTAG CAGAAATGCT AAACATTTCT TTAGGTAAAA TAAATTCTTT ACTTAAGGAA
CTATTGACTA AAGAATACAT AGTTAAAATT GATATAGATA AGAGAAATGT TAAATATGAA
TTAACTGAGG CAGGAATTGC ATTACTAGAA AATTCATTAG ATAAAGTTAA GAGTACAAAG
TTATCAATAC ATAAGCATAA ATATCATAAA GTTAAACAAG CTGTTATTTT AGGAGCTGGT
GGTAAAGGTG ATTTTGGAAA GCCATCTGGT TTTTTAGAGC TTGAAGAATT CAGAATAATT
GATAGAATAA TTGATATTTT AAAATCAAAT GGTATAGAGA AGATTGTTAT AGTAAATGGA
TATAAGAAAG AATACTATGA AGAATTAGCT GAAAAAGATT CAACAATTTT TTGTGTAACT
AATTCAAATT ATAAATGGAC AGGAACAATG AGTTCTTTAG CTTTAGCTAA GGAATATATA
GATGATGATT TTATATTGGT AGAAAATGAT CTTGTTTTTG AAAGTAGAGC TGTAGAACAA
ATTATTAAAA ATGATAATAG AGATTGTGTT TTAATTACCA ATGAAAGTGG ATCAGGGGAT
GAGGCCTTCG TTGAAATAAG AGATGGCTAT CTTTTTAAAA TGTCAAAAGA TGTACACCAA
TTTAATAAGA TTGATGGAGA AATGATTGGT ATAAGCAAAA TATCTTATAA ATTATTTAAA
ATGATGTTAG AAGAATTTAA ACATAATATA AATCCATATA TAAATTATGA GTACACTATG
TTAGATGTTG CTAGAAATTA TAAGGTTGGT TATGAAAAGA TAAATGACCT TGTTTGGGGA
GAAATTGACA ATAAAGATCA ATATGAAAAA GTAAAGAAAC ACATTATACC TATGATAAGA
AGAAAAGAAA TGCAATATAA AATAGATCAA GTAAAAAGTG CTATAGTTAA TGGATTAAAG
GTTTCAGAAG AGGAAGTTAA AGAAATAGTA CCTGTAGGAG GTATGACTAA TAAAAACTAT
AAGGCTTTTG TAAATGACAA AGCTTATATA GTAAGAATAC CAGGATTAGG TACAAGCTCT
ATGATTAATA GAAGAGATGA AATGATAAAC TCTAAACTAG CAGCAGATGA AGGAATAGAT
GCTAAAATAC TTTTCTTTGA TGAAGAATCT GGAGTAAAGA TTGCAGAACT TATAGAGGGA
GCGGAAACTC TTAATCCTGC AACGGCTAAA AAGAAAGAAA ATATGGAATT AGTGGTAGGG
GCATTAAGAA CTTTACATAA TTCAGAGATA AAAATGGAAA ATAGATTTAA TGTTTTTGAG
AAAATTGAGG ATTATGAGAG TCTTGTTAAA AAGGTTAATG GTACTCTTTT TGAAGATTAT
TATGAAATAA AAACAAGAGT ATTAAAGTTA GAAAAAGTTT TAGAAGATAA TGGAATGGAA
ATAAAACCAT GTCATAATGA TACTGTTCCA GAGAATTTTG TTAAAGATAT TAATGAAAGA
ATGTATCTAA TAGACTGGGA GTACAGTGGA TTAAATGATC CTATGTGGGA TTTAGCGGCT
CACTCAATTG AATGTGATTT TTCAGAGGAT GATGAAGAAT TATTCTTAAA TCTATATTTT
AACAATTTAA TTGAAGATAA GCATAAGATA AGAATTCTTG TTTATAAAAT ATGTCAGGAC
TTTTTATGGA GCATATGGAC TATTTTAAAA GAGGCTCAAG GCGATGATTT TGGAACTTAT
GGTATAGATA GATATAATAG AGGAAAGAAA AACTTAGATT TATTAGATAA AATTTTAATG
GGGCAATAA
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| Protein sequence | MLSYDIEVLK IINDEYNISQ RRLAEMLNIS LGKINSLLKE LLTKEYIVKI DIDKRNVKYE
LTEAGIALLE NSLDKVKSTK LSIHKHKYHK VKQAVILGAG GKGDFGKPSG FLELEEFRII
DRIIDILKSN GIEKIVIVNG YKKEYYEELA EKDSTIFCVT NSNYKWTGTM SSLALAKEYI
DDDFILVEND LVFESRAVEQ IIKNDNRDCV LITNESGSGD EAFVEIRDGY LFKMSKDVHQ
FNKIDGEMIG ISKISYKLFK MMLEEFKHNI NPYINYEYTM LDVARNYKVG YEKINDLVWG
EIDNKDQYEK VKKHIIPMIR RKEMQYKIDQ VKSAIVNGLK VSEEEVKEIV PVGGMTNKNY
KAFVNDKAYI VRIPGLGTSS MINRRDEMIN SKLAADEGID AKILFFDEES GVKIAELIEG
AETLNPATAK KKENMELVVG ALRTLHNSEI KMENRFNVFE KIEDYESLVK KVNGTLFEDY
YEIKTRVLKL EKVLEDNGME IKPCHNDTVP ENFVKDINER MYLIDWEYSG LNDPMWDLAA
HSIECDFSED DEELFLNLYF NNLIEDKHKI RILVYKICQD FLWSIWTILK EAQGDDFGTY
GIDRYNRGKK NLDLLDKILM GQ
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