Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0606 |
Symbol | |
ID | 4203859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 729995 |
End bp | 731647 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081491 |
Product | cell wall binding repeat-containing protein/zinc carboxypeptidase family protein |
Protein accession | YP_695059 |
Protein GI | 110800016 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.907737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAGAA AAAGTATTGC ATTAGTTCTT TCTTTAGGAC TGTTAGGTTC TGTTACTTTA GGTAGCATTG AAACAGTTTA TGCTGAAGGA AATAAGAACA CAACTAATAT TAGTGAAGTA AAAGTTGACA ATAAGGTAGA ATTAAGTGAC AAGAAAAACA AAGAGATAAA AAATGGATGG GAAATTATAA ATGATAAGTG GTATTATCAT GAAAGTGATG GAAGTTTAGC TACTGGGTTT AAAAAAATAA ATGATGAATG GTATCGTTTT GATAATAATG GAGAAATGCA AGTTGGCTGG CAATATATAA ATGATATATG GTACCATTTT AGAGATAATG GACCTATGGA TACTGGTTGG AGAAAGATTA ATAATGATTG GTATTATTTT AATAATGATG GAGAAATGCA AACAGGATGG CAGTCTATAG GAAATAAAAG ATATCATTTC AGAGATAATG GAGTAATGGA CACTGGTTGG AGATCATTAG GAAGTGATTG GTATCTATTA AACTCAGATG GAGAAATGCA GACAGGTTGG CAACATATAA ATAATATATG GTATCATCTT GAAGATGACG GTAAAATGAA TACTGGATGG CAAGATATAA ATGGAGACAA ATATTATTTT AATAATAGCG GCGAAATGCA AACAGGTTGG CAATATATAA ATGATATATG GTACCATTTA AGAGAAAATG GACCTGCAGA TACTGGTTGG AGAAAAATAA ATAATGACTG GTATTACTTT GATAATATAG GTAAAATGCA GACAAGCTGG CAAGATATTG ATAACTCAAC ATATTATTTC AATGATAATG GAGTTATGAG TATTGGATGG AGAACTATAG AAAGTGAATG GTATTATTTT AATAATAGTG GAGAAAAAGA AAGCAACAAA GTTATAGATG ATTGGTATTT AGATAAAAAT GGAGTAGGAA ATAAGATTGT AACTGAAGGT GTATATGGAA AGAGTGGAAA GGGTAGAGAT TTAGAATATT ATAGAATAGG ACATGGTAAA AAGGTATTAT TCTCAGTGTT TGGAGTACAT GGATATGAAG ATGCTTGGAG TGGTGATTCA CAAGAACTTA AAATAATAGC TGAAAAGTCA GTAAATAGAT TAAGAAGTGA ATATAATACT AAAGGAATAG ATTTAAGTGA ATGGAGTGTA TATATTATAC CTTCAGCTAA TCCAGATGGA AGAATTGATG GATGGACAAA CAATGGACCA GGTAGAACTA CAGTAACAAC TAAGAATGAT ATAAATAGAT CATTCCCTAC AGGATTTTCT CCTTTTTATA GTGCTAGAAA CTATACAGGA CCAACAGCAT TAGGTTCTCC AGAGGCAAAG GCTTTATATA GTTTCATAAA TAAAACTATG GAAGGAGCAA CTGAAAAAGT TCTTTTAGAT GTACATGGAT GGGAAAACAA AACAATAGGT AATCCTAGCA TTGCTAGATA TTTTGATAAT GAATTTGGCT TTAGAAATAT AAATAAATAT CCAGGTGGAT TTGTAATAAC TTATGGAAAT GCTATAGGAG CTAAATCAGT TTTAGTAGAA TTTCCAGTTC CTTATTCACA TCAAGATATA TTAAGAAGAG ATTTTTCAGG TAAATTTGCT AATGGATTAG TAAATATTCT TTTAAATAAC TAA
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Protein sequence | MKRKSIALVL SLGLLGSVTL GSIETVYAEG NKNTTNISEV KVDNKVELSD KKNKEIKNGW EIINDKWYYH ESDGSLATGF KKINDEWYRF DNNGEMQVGW QYINDIWYHF RDNGPMDTGW RKINNDWYYF NNDGEMQTGW QSIGNKRYHF RDNGVMDTGW RSLGSDWYLL NSDGEMQTGW QHINNIWYHL EDDGKMNTGW QDINGDKYYF NNSGEMQTGW QYINDIWYHL RENGPADTGW RKINNDWYYF DNIGKMQTSW QDIDNSTYYF NDNGVMSIGW RTIESEWYYF NNSGEKESNK VIDDWYLDKN GVGNKIVTEG VYGKSGKGRD LEYYRIGHGK KVLFSVFGVH GYEDAWSGDS QELKIIAEKS VNRLRSEYNT KGIDLSEWSV YIIPSANPDG RIDGWTNNGP GRTTVTTKND INRSFPTGFS PFYSARNYTG PTALGSPEAK ALYSFINKTM EGATEKVLLD VHGWENKTIG NPSIARYFDN EFGFRNINKY PGGFVITYGN AIGAKSVLVE FPVPYSHQDI LRRDFSGKFA NGLVNILLNN
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