Gene CPF_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0606 
Symbol 
ID4203859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp729995 
End bp731647 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content31% 
IMG OID638081491 
Productcell wall binding repeat-containing protein/zinc carboxypeptidase family protein 
Protein accessionYP_695059 
Protein GI110800016 
COG category[R] General function prediction only 
COG ID[COG5263] FOG: Glucan-binding domain (YG repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.907737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGAA AAAGTATTGC ATTAGTTCTT TCTTTAGGAC TGTTAGGTTC TGTTACTTTA 
GGTAGCATTG AAACAGTTTA TGCTGAAGGA AATAAGAACA CAACTAATAT TAGTGAAGTA
AAAGTTGACA ATAAGGTAGA ATTAAGTGAC AAGAAAAACA AAGAGATAAA AAATGGATGG
GAAATTATAA ATGATAAGTG GTATTATCAT GAAAGTGATG GAAGTTTAGC TACTGGGTTT
AAAAAAATAA ATGATGAATG GTATCGTTTT GATAATAATG GAGAAATGCA AGTTGGCTGG
CAATATATAA ATGATATATG GTACCATTTT AGAGATAATG GACCTATGGA TACTGGTTGG
AGAAAGATTA ATAATGATTG GTATTATTTT AATAATGATG GAGAAATGCA AACAGGATGG
CAGTCTATAG GAAATAAAAG ATATCATTTC AGAGATAATG GAGTAATGGA CACTGGTTGG
AGATCATTAG GAAGTGATTG GTATCTATTA AACTCAGATG GAGAAATGCA GACAGGTTGG
CAACATATAA ATAATATATG GTATCATCTT GAAGATGACG GTAAAATGAA TACTGGATGG
CAAGATATAA ATGGAGACAA ATATTATTTT AATAATAGCG GCGAAATGCA AACAGGTTGG
CAATATATAA ATGATATATG GTACCATTTA AGAGAAAATG GACCTGCAGA TACTGGTTGG
AGAAAAATAA ATAATGACTG GTATTACTTT GATAATATAG GTAAAATGCA GACAAGCTGG
CAAGATATTG ATAACTCAAC ATATTATTTC AATGATAATG GAGTTATGAG TATTGGATGG
AGAACTATAG AAAGTGAATG GTATTATTTT AATAATAGTG GAGAAAAAGA AAGCAACAAA
GTTATAGATG ATTGGTATTT AGATAAAAAT GGAGTAGGAA ATAAGATTGT AACTGAAGGT
GTATATGGAA AGAGTGGAAA GGGTAGAGAT TTAGAATATT ATAGAATAGG ACATGGTAAA
AAGGTATTAT TCTCAGTGTT TGGAGTACAT GGATATGAAG ATGCTTGGAG TGGTGATTCA
CAAGAACTTA AAATAATAGC TGAAAAGTCA GTAAATAGAT TAAGAAGTGA ATATAATACT
AAAGGAATAG ATTTAAGTGA ATGGAGTGTA TATATTATAC CTTCAGCTAA TCCAGATGGA
AGAATTGATG GATGGACAAA CAATGGACCA GGTAGAACTA CAGTAACAAC TAAGAATGAT
ATAAATAGAT CATTCCCTAC AGGATTTTCT CCTTTTTATA GTGCTAGAAA CTATACAGGA
CCAACAGCAT TAGGTTCTCC AGAGGCAAAG GCTTTATATA GTTTCATAAA TAAAACTATG
GAAGGAGCAA CTGAAAAAGT TCTTTTAGAT GTACATGGAT GGGAAAACAA AACAATAGGT
AATCCTAGCA TTGCTAGATA TTTTGATAAT GAATTTGGCT TTAGAAATAT AAATAAATAT
CCAGGTGGAT TTGTAATAAC TTATGGAAAT GCTATAGGAG CTAAATCAGT TTTAGTAGAA
TTTCCAGTTC CTTATTCACA TCAAGATATA TTAAGAAGAG ATTTTTCAGG TAAATTTGCT
AATGGATTAG TAAATATTCT TTTAAATAAC TAA
 
Protein sequence
MKRKSIALVL SLGLLGSVTL GSIETVYAEG NKNTTNISEV KVDNKVELSD KKNKEIKNGW 
EIINDKWYYH ESDGSLATGF KKINDEWYRF DNNGEMQVGW QYINDIWYHF RDNGPMDTGW
RKINNDWYYF NNDGEMQTGW QSIGNKRYHF RDNGVMDTGW RSLGSDWYLL NSDGEMQTGW
QHINNIWYHL EDDGKMNTGW QDINGDKYYF NNSGEMQTGW QYINDIWYHL RENGPADTGW
RKINNDWYYF DNIGKMQTSW QDIDNSTYYF NDNGVMSIGW RTIESEWYYF NNSGEKESNK
VIDDWYLDKN GVGNKIVTEG VYGKSGKGRD LEYYRIGHGK KVLFSVFGVH GYEDAWSGDS
QELKIIAEKS VNRLRSEYNT KGIDLSEWSV YIIPSANPDG RIDGWTNNGP GRTTVTTKND
INRSFPTGFS PFYSARNYTG PTALGSPEAK ALYSFINKTM EGATEKVLLD VHGWENKTIG
NPSIARYFDN EFGFRNINKY PGGFVITYGN AIGAKSVLVE FPVPYSHQDI LRRDFSGKFA
NGLVNILLNN