Gene CPF_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0603 
Symbol 
ID4202517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp725221 
End bp725961 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content27% 
IMG OID638081488 
Producthypothetical protein 
Protein accessionYP_695056 
Protein GI110800674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000500963 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG TGAAAAGAAA ATTAAAGAAC ATAGTAAGAA ATATTATGTT GAGTGAAACT 
TTTGCAAATA CAAATTTAGT AAAAAATATG AGGAAAAATC ATAAAGAGAA ATTAGAAGAA 
GGAAGAAGAG TTTTATTTAA AGAGCATGCT AAAGATTGTT TAGAAACTAT AAAGGAAAAT 
TTAGATAAGA ATAATCTTCA TTTTTGGCTT GATTATGGAA CTTTGCTTGG AGCTATGAGA 
GAAAAGGATT TTATAGCACA CGATTTAGAT ATAGATTTAG GAATGTTTTA CGAAAATCAA 
GTTGAAGAAG TAGAAAAAGC TTTTAAAGAA GCTAATATAA AAAAAGTTCG TGAATTTACT 
TTAGATGGTA AGGTAGTAGA GCAAACATAT AGCTATAAAG GGTTATACTT TGATATATTT 
TACTATTTTA AAGATGAAAA TCTTATGTGG ACATATGGAT TTACTTTTAA AAATAATAAA 
CTAAATAAAG TTAGTTATAA AGATAAGGAT GTATCAACTG GCTTTGAAGG AATGAAGTAT 
TTTGTTAAGA AGAGAGGCCT TGAAAAAATC ATGTTTAAAG GAAAAGAATA TACAGTTCCT 
GAAAATCCAG ATGGTTATTT AAGAGAAAAT TATGGACCAA ATTATATGAC ACCTATAAAG 
GAATGGGATT ATGTAGAAGC ACCAACAAAT CAAGAAAAGT TAAAGGGTGG AGACATAGTA 
ATGATAGAAT ATTATAATTA G
 
Protein sequence
MSKVKRKLKN IVRNIMLSET FANTNLVKNM RKNHKEKLEE GRRVLFKEHA KDCLETIKEN 
LDKNNLHFWL DYGTLLGAMR EKDFIAHDLD IDLGMFYENQ VEEVEKAFKE ANIKKVREFT 
LDGKVVEQTY SYKGLYFDIF YYFKDENLMW TYGFTFKNNK LNKVSYKDKD VSTGFEGMKY 
FVKKRGLEKI MFKGKEYTVP ENPDGYLREN YGPNYMTPIK EWDYVEAPTN QEKLKGGDIV 
MIEYYN