Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0601 |
Symbol | |
ID | 4203792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 723068 |
End bp | 724282 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 638081486 |
Product | hypothetical protein |
Protein accession | YP_695054 |
Protein GI | 110799952 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0347333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTAA GAAATAAATC AAACACAAAG TATGAACTTT TTATATATTT TGTGCTATTC TCAATATTTA TTAGAGACTT TAAAATATAT ATACCTCTAT TTGTACTAAA TATATTATAT GTTATATATC TTATTTTTAA AAAAGAGATA CATATAAATT TAAAAAAATG GAATATTACT TTAGCTTTAT TTATAATATG GACAGTTATA AATACTATAA TAGCAAGTTT TATTTTTAAA CATCCTGTAT ATTATTCAAA TGTTATAAAA CTTTTGCTTA ATATGAGTTT TCTATTATCA ACATATTTTG TTGTAGATGG AACAAATATG AAGTTCCATA AGAAAACTTT AGTTAGATTT TTAGAGTTTA TAATATTGAT TAATTTTATA CAAATTATAT ATATTTATTT TGATGGCAAG TTATTTAATG ATTTTTTTAG TGGCGCACTA ACAGAAAGTT CTGATGCAGC TTATACAATC AGTAGTTATC ATAATATAAT TGGAGCAGAA AATAAGAATA TTTGGGCTAC TAAGTTTGCA TTAATATATA TGATATACCT TTACATATGT GCCTTCGATA ATTTTAATAT AAATTTAATT GAAAAAATAA GTTTTATAAT TTTAGGGATA GTAACAGTTG TACTTTTATT AAGCAGAACT GCTCAAGTAG CTATAATAAT ACCGATAGTA TTTTTAGCTT TTTATAGTAT GAGAAATTTA AATTATAAAT ATAGAATAGG TATATATGCA GTAAGTGGAA TTTTATTCTT GGGAGCACTG TTTGTCTTTT TTGATAAATT TTTCCACTTA GAGTTTAATA TGACAGATGG TGGCTTTACA AGATTATATA TATGGAAAGA ATTTATTATA AGCGTTTTTG ATACTCATTT TATAGTAGGT AATGGTATAG GATATAGTGC TTATTTCATT CAGGATATAT TAGGAAGGTT TGAATCAAAT CTTCATAACG TATTTCTTAA TATATTTTTT GAACTTGGAA TAATAGGAAT TGTTCTTTAT ATTACCTTTA TAATTCAATT TTTTAAAGAT TTTATTACAA GAAAAAATAT ATTGAAAAAT TTATTTATGA TAATATTTCC TATGTTAGCC ATAGTTTGTT TACAATACTT AGGATATGAT AATGATTTAG TAGTAACTTT AACACTATTA ATTATAATAA ATATGATTAT GAAGAAAGAT GAGCAAAGAA TATGA
|
Protein sequence | MNLRNKSNTK YELFIYFVLF SIFIRDFKIY IPLFVLNILY VIYLIFKKEI HINLKKWNIT LALFIIWTVI NTIIASFIFK HPVYYSNVIK LLLNMSFLLS TYFVVDGTNM KFHKKTLVRF LEFIILINFI QIIYIYFDGK LFNDFFSGAL TESSDAAYTI SSYHNIIGAE NKNIWATKFA LIYMIYLYIC AFDNFNINLI EKISFIILGI VTVVLLLSRT AQVAIIIPIV FLAFYSMRNL NYKYRIGIYA VSGILFLGAL FVFFDKFFHL EFNMTDGGFT RLYIWKEFII SVFDTHFIVG NGIGYSAYFI QDILGRFESN LHNVFLNIFF ELGIIGIVLY ITFIIQFFKD FITRKNILKN LFMIIFPMLA IVCLQYLGYD NDLVVTLTLL IIINMIMKKD EQRI
|
| |