Gene CPF_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0601 
Symbol 
ID4203792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp723068 
End bp724282 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content22% 
IMG OID638081486 
Producthypothetical protein 
Protein accessionYP_695054 
Protein GI110799952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0347333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA GAAATAAATC AAACACAAAG TATGAACTTT TTATATATTT TGTGCTATTC 
TCAATATTTA TTAGAGACTT TAAAATATAT ATACCTCTAT TTGTACTAAA TATATTATAT
GTTATATATC TTATTTTTAA AAAAGAGATA CATATAAATT TAAAAAAATG GAATATTACT
TTAGCTTTAT TTATAATATG GACAGTTATA AATACTATAA TAGCAAGTTT TATTTTTAAA
CATCCTGTAT ATTATTCAAA TGTTATAAAA CTTTTGCTTA ATATGAGTTT TCTATTATCA
ACATATTTTG TTGTAGATGG AACAAATATG AAGTTCCATA AGAAAACTTT AGTTAGATTT
TTAGAGTTTA TAATATTGAT TAATTTTATA CAAATTATAT ATATTTATTT TGATGGCAAG
TTATTTAATG ATTTTTTTAG TGGCGCACTA ACAGAAAGTT CTGATGCAGC TTATACAATC
AGTAGTTATC ATAATATAAT TGGAGCAGAA AATAAGAATA TTTGGGCTAC TAAGTTTGCA
TTAATATATA TGATATACCT TTACATATGT GCCTTCGATA ATTTTAATAT AAATTTAATT
GAAAAAATAA GTTTTATAAT TTTAGGGATA GTAACAGTTG TACTTTTATT AAGCAGAACT
GCTCAAGTAG CTATAATAAT ACCGATAGTA TTTTTAGCTT TTTATAGTAT GAGAAATTTA
AATTATAAAT ATAGAATAGG TATATATGCA GTAAGTGGAA TTTTATTCTT GGGAGCACTG
TTTGTCTTTT TTGATAAATT TTTCCACTTA GAGTTTAATA TGACAGATGG TGGCTTTACA
AGATTATATA TATGGAAAGA ATTTATTATA AGCGTTTTTG ATACTCATTT TATAGTAGGT
AATGGTATAG GATATAGTGC TTATTTCATT CAGGATATAT TAGGAAGGTT TGAATCAAAT
CTTCATAACG TATTTCTTAA TATATTTTTT GAACTTGGAA TAATAGGAAT TGTTCTTTAT
ATTACCTTTA TAATTCAATT TTTTAAAGAT TTTATTACAA GAAAAAATAT ATTGAAAAAT
TTATTTATGA TAATATTTCC TATGTTAGCC ATAGTTTGTT TACAATACTT AGGATATGAT
AATGATTTAG TAGTAACTTT AACACTATTA ATTATAATAA ATATGATTAT GAAGAAAGAT
GAGCAAAGAA TATGA
 
Protein sequence
MNLRNKSNTK YELFIYFVLF SIFIRDFKIY IPLFVLNILY VIYLIFKKEI HINLKKWNIT 
LALFIIWTVI NTIIASFIFK HPVYYSNVIK LLLNMSFLLS TYFVVDGTNM KFHKKTLVRF
LEFIILINFI QIIYIYFDGK LFNDFFSGAL TESSDAAYTI SSYHNIIGAE NKNIWATKFA
LIYMIYLYIC AFDNFNINLI EKISFIILGI VTVVLLLSRT AQVAIIIPIV FLAFYSMRNL
NYKYRIGIYA VSGILFLGAL FVFFDKFFHL EFNMTDGGFT RLYIWKEFII SVFDTHFIVG
NGIGYSAYFI QDILGRFESN LHNVFLNIFF ELGIIGIVLY ITFIIQFFKD FITRKNILKN
LFMIIFPMLA IVCLQYLGYD NDLVVTLTLL IIINMIMKKD EQRI