Gene CPF_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0583 
Symbol 
ID4202385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp699497 
End bp700219 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content30% 
IMG OID638081468 
Productamino acid ABC transporter, ATP-binding protein 
Protein accessionYP_695036 
Protein GI110799193 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATG TTAGAAATTT ATATAAAAGT TTTGGTAAAA ATGAGGTTTT AAAAGATATA 
AATGAAACAA TAAAAAAGGG AGAAGTAGTA GTTATAATAG GACCTTCAGG ATCAGGAAAA
AGCACATTTT TAAGATGCTT AAATTTATTA GAGGAACCCA CTTCAGGGGT AATTAATTTT
GAAGGGGAAG ATATAACAGA TAAAAATGTT GATATAAATA AAATAAGAGA AAAGATGGGA
ATGGTTTTTC AACAATTTAA TCTTTTCCCA CATAAAACAG TTATGGAAAA TTTAACAATA
GGACCAACAA AAATAAAAAA TATTTCTAAT GGTGACGCTG TAAAAAAAGG AAGTGAATTA
TTAGAAAAGG TAGGTCTTTT AGATAAAAAG AATGTTTATC CAAATTCACT TTCAGGAGGA
CAAAAACAGA GAATAGCTAT AGCAAGAGCT TTAGCTATGG AACCAGATGT TATGCTTTTT
GATGAGCCAA CATCTGCTTT GGACCCTGAA ATGGTAGGAG AAGTTTTAGG AGTTATGAAA
TCTTTAGCTA AAGATGGAAT GACCATGGTT GTAGTAACCC ATGAAATGGG CTTTGCAAAG
GAAGTTGGAG ATAGAATATT ATTTATGGAT GAAGGAAGAA TAATTGAAGA AGGTACTCCA
GAGGAGATAT TTCAAAATCC TAAAAATTCA AGAACTAAAG ATTTTTTATC AAAAGTTTTA
TAA
 
Protein sequence
MINVRNLYKS FGKNEVLKDI NETIKKGEVV VIIGPSGSGK STFLRCLNLL EEPTSGVINF 
EGEDITDKNV DINKIREKMG MVFQQFNLFP HKTVMENLTI GPTKIKNISN GDAVKKGSEL
LEKVGLLDKK NVYPNSLSGG QKQRIAIARA LAMEPDVMLF DEPTSALDPE MVGEVLGVMK
SLAKDGMTMV VVTHEMGFAK EVGDRILFMD EGRIIEEGTP EEIFQNPKNS RTKDFLSKVL